DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d16

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_006532756.1 Gene:Tbc1d16 / 207592 MGIID:2652878 Length:782 Species:Mus musculus


Alignment Length:412 Identity:102/412 - (24%)
Similarity:147/412 - (35%) Gaps:155/412 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DVLAGPQDLIDLKQ------LRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKRALY 71
            ||.|....|.||.|      ||:..|.|..|| |.|...|..||.|.     |..:|..::.||.
Mouse   412 DVSAWLNHLNDLGQVEEEYKLRQAIFFGGIDV-SIRGEVWPFLLHYY-----SHESTSEEREALR 470

  Fly    72 KQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDV 136
            .|..:|.                         ..:|...||..||.. ..|:.:.:|  .:||||
Mouse   471 SQKRKEY-------------------------AAIQQKRLSMTPEEQ-RAFWRNVQF--TVDKDV 507

  Fly   137 RRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVE 201
            .|...:..||              :||              .:.|||.                 
Mouse   508 VRTDRNNQFF--------------RGE--------------DNPNVES----------------- 527

  Fly   202 NYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFF 266
                           ::|||..||..||..||.|||:::|.||   :|...|       |:|.|:
Mouse   528 ---------------MRRILLNYAVYNPAIGYSQGMSDLVAPI---LAEVLD-------ESDTFW 567

  Fly   267 CFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYS-------- 323
            ||..||.  ...|:.:..|.:             ::.:.|.:.||||.  .|.::|.        
Mouse   568 CFVGLMQ--NTIFVSSPRDED-------------MERQLLYLRELLRL--THQRFYQHLVSLGED 615

  Fly   324 -------FRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDFASNV 381
                   .|||.|...:|||..:.||||::.:|..|...|.:.||.:::.|..:.::|...|::.
Mouse   616 GLQMLFCHRWLLLCFKREFPEAEALRIWEACWAHYQTDYFHLFICVAIVAIYGDDVIEQQLATDQ 680

  Fly   382 KLLQNYPPIDINVVIAHAGSLA 403
            .||             |.|:||
Mouse   681 MLL-------------HFGNLA 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 50/196 (26%)
Tbc1d16XP_006532756.1 TBC 439..667 CDD:214540 83/348 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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