DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and tbc-13

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001359553.1 Gene:tbc-13 / 181406 WormBaseID:WBGene00009726 Length:425 Species:Caenorhabditis elegans


Alignment Length:405 Identity:182/405 - (44%)
Similarity:248/405 - (61%) Gaps:30/405 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQ 66
            |.:..|:.:.|:||......||:.:||.....|||  :|.|.|:|:|||.||...|..|.|.||:
 Worm     3 SRYMERLAKIEEVLLIANKKIDINELRAGCSYGVP--ESLRPLAWRLLLHYLPLERHKWQTFLAE 65

  Fly    67 KRALYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQ 131
            :|..|.|.||::::.||.:|.:.|......:          |||||:.|.|.|..||.||:.|.|
 Worm    66 QRDNYDQMIEQIIVEPGTASLQQSAAQNQDN----------DHPLSDHPTSDWQAFFQDNKVLSQ 120

  Fly   132 IDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRR--LHERVV-PAVLSSA--NVERKGL-GMT 190
            ||||||||.|:|.|||..:.:|     |   :||.:  |..||: ...|.|.  ...|.|: |..
 Worm   121 IDKDVRRLYPEIQFFQLLSRFP-----H---QHGMKYPLSRRVINHQELHSQEFGANRDGIVGCV 177

  Fly   191 KINLITKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLT 255
            |.|:..:...||.|   ...|.||.:|:||||||||||||..|||||||:|.|||||.|:|.|..
 Worm   178 KTNIAKQSQDENQA---PNSEFHWHIVERILFIYAKLNPGVQYVQGMNELVAPIYYVFANDADDE 239

  Fly   256 YRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNMLKSKDLSIYE-LLRSQELHP 319
            :.|:||||.||||..||||::|.|||.|||:..||:..|:...|::.:.|..::: |..:.|:.|
 Worm   240 WAAYAEADTFFCFQQLMSEVKDNFIKKLDDSNCGIESSMSAFHNLISTFDTELHKHLTLTLEIKP 304

  Fly   320 QYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDFASNVKLL 384
            |:|:||||:||||||||||||:.:||::|:|.|||..|..:|.:|:.::||.::..||...|:||
 Worm   305 QFYAFRWLSLLLSQEFPLPDVITLWDALFSDPQRFALLQYVCLAMMELKREPLINGDFPFCVRLL 369

  Fly   385 QNYPPIDINVVIAHA 399
            ||||..||..::|.|
 Worm   370 QNYPDTDIAKIVAFA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 95/182 (52%)
tbc-13NP_001359553.1 TBC 32..358 CDD:214540 160/348 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166917
Domainoid 1 1.000 183 1.000 Domainoid score I2044
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10068
Inparanoid 1 1.050 317 1.000 Inparanoid score I1519
Isobase 1 0.950 - 0 Normalized mean entropy S2189
OMA 1 1.010 - - QHG54276
OrthoDB 1 1.010 - - D350831at33208
OrthoFinder 1 1.000 - - FOG0001234
OrthoInspector 1 1.000 - - oto19839
orthoMCL 1 0.900 - - OOG6_102218
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1952
SonicParanoid 1 1.000 - - X4286
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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