DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and tbc-12

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_508458.1 Gene:tbc-12 / 180556 WormBaseID:WBGene00044061 Length:614 Species:Caenorhabditis elegans


Alignment Length:214 Identity:54/214 - (25%)
Similarity:92/214 - (42%) Gaps:28/214 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 NVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIY 245
            :.|||...:|:|:|...|:..: ..|.:....:::.:.::|..||.|.|..||||.|..|...:.
 Worm   345 SAERKETSVTQIHLDATRTFTS-LGMFQKDGPYYDHLLKLLSAYAILRPDIGYVQSMTFIAAVLL 408

  Fly   246 YVMASDPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIK------FMMARLSNMLKSK 304
            ..|  ||   |.|      |..|..|:.       ::|..|..|:|      :.:| ....|:.:
 Worm   409 IQM--DP---YPA------FISFANLLD-------RSLQSAFFGLKQPQMTEYFIA-YDRYLEQE 454

  Fly   305 DLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQR 369
            ..::::.|...::.|..|...|...:.::..||....||||..|.|.:  :||.|....::.:..
 Worm   455 LPALHQHLDKLDVRPDLYLIEWTFAMYAKSLPLDVTCRIWDVYFRDGE--EFLFKAALGILRMYE 517

  Fly   370 EAILENDFASNVKLLQNYP 388
            ..:|..||...|:.|...|
 Worm   518 PKLLTMDFDDCVEFLTKLP 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 44/187 (24%)
tbc-12NP_508458.1 TBC 295..521 CDD:214540 48/197 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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