DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and tbc1d9b

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_009305930.1 Gene:tbc1d9b / 100332046 -ID:- Length:1218 Species:Danio rerio


Alignment Length:285 Identity:62/285 - (21%)
Similarity:97/285 - (34%) Gaps:93/285 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 EIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEVVQR 219
            |:..| .|.:|..:.:.:....|::..:||.          ..||:..:.|.:  .|.....::|
Zfish   515 EMATH-PGYYGNLVEQAMGRCTLATEEIERD----------LHRSMPEHHAFQ--NETGIAALRR 566

  Fly   220 ILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLD 284
            :|..||..|||.||.|.||.:...:         |.|....||  |:...||...:...:..|  
Zfish   567 VLTAYAYRNPGIGYCQAMNIVTSVL---------LLYCTEEEA--FWLLVALCERMLPDYYNT-- 618

  Fly   285 DAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYY------------SFRW-LTLLLSQEFP 336
                       |:...|  .|..::|.| ::|..|..|            |..| |||.|| ..|
Zfish   619 -----------RVVGAL--VDQGVFEEL-TRECLPLLYEHMQDLGVISTISLSWFLTLFLS-VMP 668

  Fly   337 LPDVLRIWDSVFADEQRFDFLIKIC-----------CS-----MILIQREAILENDFASNVKLLQ 385
            ....:.:.|..|.:..:..|.:.:.           ||     |.::.|       :..||...|
Zfish   669 FDSAVLLVDCFFYEGIKVIFQVSLAVLHANMDQLLSCSDEGEAMTILGR-------YLDNVVNKQ 726

  Fly   386 ----------------NYPPIDINV 394
                            |.||.:|:|
Zfish   727 TVSPPIPHLHALLTSGNNPPPEIDV 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 47/210 (22%)
tbc1d9bXP_009305930.1 PH-GRAM1_TCB1D9_TCB1D9B 153..251 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 300..395 CDD:270161
TBC 493..703 CDD:214540 50/228 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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