DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S-Lap1 and lap3

DIOPT Version :9

Sequence 1:NP_648244.1 Gene:S-Lap1 / 38986 FlyBaseID:FBgn0035915 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001108319.1 Gene:lap3 / 562854 ZFINID:ZDB-GENE-060719-1 Length:517 Species:Danio rerio


Alignment Length:493 Identity:217/493 - (44%)
Similarity:300/493 - (60%) Gaps:17/493 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RALVIGVYADEEDKNDAGILTPAGWRYNLQKTNGRLIEVLRMSGPMPKRGEARLLFAVEPERIPY 118
            :.||:|||..:.| :|...||.|...:: :..:|||.|:|.:|||..|:|::|:.:.:..:    
Zfish    32 KGLVLGVYEQQSD-SDGVSLTEAAAAFD-RSLSGRLSEMLSLSGPPLKKGKSRIFYGLHQD---- 90

  Fly   119 YSVVAVVGLGKECLGYNPYEVLDEQKEAIRRSVAAACRILAELDTDRIEVENCGHAESAAEGAAL 183
            :..|.||||||...|....|..|..||.||.:|:|.||.|.:|:...:||:.||..:||||||.|
Zfish    91 FPSVVVVGLGKSDPGVCGKENWDNCKENIRAAVSAGCRQLQDLEVALVEVDPCGDDQSAAEGAVL 155

  Fly   184 GIWLYQELRDPKTRIFVPAIDLYATKDEVCDIEGWRIGLQKAAAQNLTRQLQEMPSNLLTPTAFA 248
            |::.|.||:..|      .:.:........|...|:.|:.....|||.|||.|.|:|.:|||.||
Zfish   156 GLFEYDELKTKK------KVHVKTRPHGSVDAAAWQKGVLYGDGQNLARQLMEAPANHVTPTVFA 214

  Fly   249 QNVVEVLC--KSGVNVEVKVEGWAESQSMHAFLAVGKASCEPPIFLELSYYGTC-AEERPIVLVG 310
            ..:.:.|.  ...|.|..:.:.|.|.:.|.|||:|.|.|.|||:||||.|.|:. :.:.|:||||
Zfish   215 NTIEQKLSLFADRVIVHKRPQSWIEGEQMGAFLSVSKGSEEPPVFLELHYKGSSDSAQPPLVLVG 279

  Fly   311 QGITYDAGGLCLKKKKELFNMRGDMTGAAVVVATCRAVAGLRLPVNIRGLIPLCENVVGCNSFRP 375
            :|||:|:||:.||....:..||.||.|||.|.:.....|.|::|:||.||.|||||:....:.:|
Zfish   280 KGITFDSGGISLKPSSGMDAMRADMGGAATVCSAIVTAAALKIPINIIGLAPLCENMPSGKANKP 344

  Fly   376 GDMVKSMNGKTIEVQCTDHEDVLVLADALLYAQNFCPKCIIDIGTCSGYMRQSLDEAACGVFTNS 440
            ||:|::.|||||::..||.|..|:|||||.||.:|.|:.||:..|.:|.|..:|..||.||||||
Zfish   345 GDVVRAKNGKTIQIDNTDAEGRLILADALCYAHSFKPRAIINAATLTGAMDVALGSAATGVFTNS 409

  Fly   441 EILWQQIKHASMHTGDRVWRFPLWNFYSKAVRAGGRSDVQNYG-IGRGGRPCKAAAFLREFVPCG 504
            :.||:::..||:.|||||||.||:..|:|.|.....:|:.|.| ..|.|..|.|||||:|||...
Zfish   410 DWLWERLHKASVVTGDRVWRMPLFQHYTKQVTDSALADLNNVGKYSRSGGACTAAAFLKEFVSAN 474

  Fly   505 QWMHIDATNVMVTNGIDFEYLRRGMAGRPTRTLIEFIA 542
            .|.|:|...|| ||..:..|||:||:|||||||:||||
Zfish   475 HWAHLDIAGVM-TNKDEVPYLRKGMSGRPTRTLVEFIA 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S-Lap1NP_648244.1 PRK00913 44..542 CDD:234863 215/491 (44%)
Peptidase_M17 55..541 CDD:238247 214/489 (44%)
lap3NP_001108319.1 Peptidase_M17 32..510 CDD:238247 214/490 (44%)
PRK00913 34..511 CDD:234863 215/489 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596388
Domainoid 1 1.000 288 1.000 Domainoid score I1536
eggNOG 1 0.900 - - E1_COG0260
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 381 1.000 Inparanoid score I2017
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D399611at33208
OrthoFinder 1 1.000 - - FOG0001058
OrthoInspector 1 1.000 - - otm24462
orthoMCL 1 0.900 - - OOG6_100682
Panther 1 1.100 - - O PTHR11963
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1683
SonicParanoid 1 1.000 - - X713
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

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