DRSC/TRiP Functional Genomics Resources

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Protein Alignment USP27X and Usp27x

DIOPT Version :9

Sequence 1:NP_001138545.1 Gene:USP27X / 389856 HGNCID:13486 Length:438 Species:Homo sapiens
Sequence 2:XP_006256824.2 Gene:Usp27x / 302566 RGDID:1564628 Length:756 Species:Rattus norvegicus


Alignment Length:438 Identity:423/438 - (96%)
Similarity:429/438 - (97%) Gaps:0/438 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MCKDYVYDKDIEQIAKEEQGEALKLQASTSTEVSHQQCSVPGLGEKFPTWETTKPELELLGHNPR 65
            ||||||||.|||||||||||||||||||||||.|.||||||.||||:||||||||||||||||||
  Rat   319 MCKDYVYDIDIEQIAKEEQGEALKLQASTSTEFSQQQCSVPSLGEKYPTWETTKPELELLGHNPR 383

Human    66 RRRITSSFTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLF 130
            ||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   384 RRRIASSFTIGLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLF 448

Human   131 RELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHC 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|:|||||
  Rat   449 RELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHC 513

Human   196 NCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESHIPGI 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||:
  Rat   514 NCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESHIPGV 578

Human   261 TTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITT 325
            |||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
  Rat   579 TTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITT 643

Human   326 YISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGTLESGHYTSFIRHHKD 390
            |||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||:|
  Rat   644 YISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQGTLESGHYTSFIRHHRD 708

Human   391 QWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLEHESEKVKEMNTQAY 438
            ||||||||||||||||||||||||||||||||||||.||||||.||||
  Rat   709 QWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLEHEPEKVKEMTTQAY 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
USP27XNP_001138545.1 Peptidase_C19D 78..419 CDD:239125 333/340 (98%)
Usp27xXP_006256824.2 zf-UBP 268..328 CDD:396634 8/8 (100%)
Peptidase_C19D 396..737 CDD:239125 333/340 (98%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 713 1.000 Domainoid score I3438
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6668
Inparanoid 1 1.050 891 1.000 Inparanoid score I6514
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG59954
OrthoDB 1 1.010 - - D14000at314146
OrthoFinder 1 1.000 - - FOG0002382
OrthoInspector 1 1.000 - - oto130133
orthoMCL 1 0.900 - - OOG6_102914
Panther 1 1.100 - - LDO PTHR21646
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1575
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1515.480

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