DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5989 and LETMD1

DIOPT Version :9

Sequence 1:NP_648242.1 Gene:CG5989 / 38984 FlyBaseID:FBgn0017429 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_016874640.1 Gene:LETMD1 / 25875 HGNCID:24241 Length:420 Species:Homo sapiens


Alignment Length:310 Identity:78/310 - (25%)
Similarity:146/310 - (47%) Gaps:18/310 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 NMQDYIFTRYFNYVKNYDKVLEKNFPKAMQLYRVFFDGVKDFFGDMKRFLKIARIANDSPQGIR- 188
            |:..|:.|:.......|.:.|.::||:...||.:|..|::..:.|.|:..:|.  .|.....|: 
Human    62 NLMSYVVTKTKAINGKYHRFLGRHFPRFYVLYTIFMKGLQMLWADAKKARRIK--TNMWKHNIKF 124

  Fly   189 -ALNRQELELYMQMPRDMMKVAPALIGCSLPMVGYAFFPLVFYYPRSFLTAHFWTPQQRSEFQSY 252
             .|..:|:|...|..:|:.|.....|....|...|..|.|::.:||..|..|||||:|:::|...
Human   125 HQLPYREMEHLRQFRQDVTKCLFLGIISIPPFANYLVFLLMYLFPRQLLIRHFWTPKQQTDFLDI 189

  Fly   253 YMKRRLCNNKDVFRCLQDKLKATASHPKHSAFADILGQLGSGTHPTPEMLIDVKDIFAEGPYSLL 317
            |...|..::.::...|:..:...:.........|:..::..||||....::.:::.|:..|..:.
Human   190 YHAFRKQSHPEIISYLEKVIPLISDAGLRWRLTDLCTKIQRGTHPAIHDILALRECFSNHPLGMN 254

  Fly   318 GMSRKHVRNLVNLHGLPSSI---FKRHRLHEHAFLVHYMDQAITREGGVHNLTPDALRYSCYLRG 379
            .:...||:.|.....|.|.:   ..||||..|..::|.:|:|:.:. |:..||...::.:|||||
Human   255 QLQALHVKALSRAMLLTSYLPPPLLRHRLKTHTTVIHQLDKALAKL-GIGQLTAQEVKSACYLRG 318

  Fly   380 LNPDSLSSEAMIEWLRKWVKVSTSIQGE----------HITLFLHLPILL 419
            ||...:..:....||.:|:::|.|::|:          .:|...:..::|
Human   319 LNSTHIGEDRCRTWLGEWLQISCSLKGKTHFCGYTTKIQVTFVFYSEVIL 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5989NP_648242.1 LETM1 150..403 CDD:285063 68/257 (26%)
LETMD1XP_016874640.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147870
Domainoid 1 1.000 121 1.000 Domainoid score I5740
eggNOG 1 0.900 - - E1_KOG4263
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9128
Inparanoid 1 1.050 134 1.000 Inparanoid score I4592
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49830
OrthoDB 1 1.010 - - D330259at33208
OrthoFinder 1 1.000 - - FOG0007243
OrthoInspector 1 1.000 - - oto89029
orthoMCL 1 0.900 - - OOG6_107505
Panther 1 1.100 - - LDO PTHR14009
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4074
SonicParanoid 1 1.000 - - X5346
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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