DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5989 and letm-1

DIOPT Version :10

Sequence 1:NP_648242.1 Gene:CG5989 / 38984 FlyBaseID:FBgn0017429 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_506381.1 Gene:letm-1 / 179854 WormBaseID:WBGene00010279 Length:784 Species:Caenorhabditis elegans


Alignment Length:45 Identity:12/45 - (26%)
Similarity:20/45 - (44%) Gaps:12/45 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 ITITSRDADAAEEEEVVLQITGDEHDEKEEDGEDLFNDNFLDDYR 102
            |.|.:|:    :||.:.:|:   ||:..     ||..:.....||
 Worm    14 IMIQARN----KEENLEIQL---EHNHL-----DLVTEKRKQPYR 46

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5989NP_648242.1 LETM1_RBD 190..418 CDD:462258
letm-1NP_506381.1 LETM1_RBD 129..353 CDD:462258
PLN03229 <479..684 CDD:178768
Blue background indicates that the domain is not in the aligned region.

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