DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL14 and Rpl27

DIOPT Version :9

Sequence 1:NP_523975.1 Gene:RpL14 / 38983 FlyBaseID:FBgn0017579 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_071959.1 Gene:Rpl27 / 64306 RGDID:621192 Length:136 Species:Rattus norvegicus


Alignment Length:117 Identity:27/117 - (23%)
Similarity:42/117 - (35%) Gaps:40/117 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RFVQTGRIAKASAGPLKGRLVAIVDVIDQ-------NRVLVDGPLTGVPR--------------- 47
            :|::.|::....||...||...||..||.       :..||.| :...||               
  Rat     3 KFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAG-IDRYPRKVTAAMGKKKIAKRS 66

  Fly    48 ------QEYRLNNLHLTKYRIKFP----------YTAPTRIVRKAWTESDLK 83
                  :.|..|:|..|:|.:..|          :..|. :.|||..|:.:|
  Rat    67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPA-LKRKARREAKVK 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL14NP_523975.1 KOW_RPL14 7..81 CDD:240512 25/111 (23%)
Ribosomal_L14e 46..120 CDD:307859 14/69 (20%)
Rpl27NP_071959.1 KOW 1..136 CDD:412330 27/117 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2163
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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