DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL14 and rpl6

DIOPT Version :10

Sequence 1:NP_523975.1 Gene:RpL14 / 38983 FlyBaseID:FBgn0017579 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_001003844.2 Gene:rpl6 / 336727 ZFINID:ZDB-GENE-030131-8671 Length:265 Species:Danio rerio


Alignment Length:137 Identity:28/137 - (20%)
Similarity:50/137 - (36%) Gaps:37/137 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTR 71
            :..|.:.....|..:|:.|..:..:|...:||.|||.        :|.:.|.:...||.....|:
Zfish   121 ITPGTVLIMLTGRHRGKRVVFLKQLDSGLLLVTGPLA--------INRVPLRRAHQKFCIATNTK 177

  Fly    72 IVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNT------L 130
            :                   .:....|.:..:.:.|.:.|||..|.|..::    |:|      |
Zfish   178 V-------------------DISGMKIPRTLTDSYFKKKKLRKPKHQEGEI----FDTEKEKYQL 219

  Fly   131 KKRTKAD 137
            .::.|||
Zfish   220 TEQRKAD 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL14NP_523975.1 eL14 5..123 CDD:467915 22/115 (19%)
rpl6NP_001003844.2 Ribosomal_L6e_N 6..>48 CDD:427554
KOW_RPL6 113..265 CDD:240520 28/137 (20%)
Blue background indicates that the domain is not in the aligned region.

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