DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RpL14 and Rpl6

DIOPT Version :9

Sequence 1:	NP_523975.1	Gene:	RpL14 / 38983	FlyBaseID:	FBgn0017579	Length:	166	Species:	Drosophila melanogaster
Sequence 2:	NP_035420.2	Gene:	Rpl6 / 19988	MGIID:	108057	Length:	296	Species:	Mus musculus

Alignment Length:	149	Identity:	33/149 - (22%)
Similarity:	56/149 - (37%)	Gaps:	44/149 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 PFERFVQ-------TGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTK 59
            ||.:.|:       .|.:.....|..:|:.|..:..:|...:||.|||.        :|.:.|.:
Mouse   140 PFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLV--------INRVPLRR 196

  Fly    60 YRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLT 124
            ...||.....|::     ..||:|              |.|..:...|.:.:||..:.|..::
Mouse   197 THQKFVIATSTKV-----DISDVK--------------IPKHLTDAYFKKKQLRKPRHQEGEI-- 240

  Fly   125 IAFNTLKKR------TKAD 137
              |:|.|::      .|||
Mouse   241 --FDTEKEKYEITEQRKAD 257

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpL14	NP_523975.1	KOW_RPL14	7..81	CDD:240512	16/80 (20%)
RpL14	NP_523975.1	Ribosomal_L14e	46..120	CDD:307859	14/73 (19%)
Rpl6	NP_035420.2	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..53
		Ribosomal_L6e_N	50..103	CDD:367701
		KOW_RPL6	144..296	CDD:240520	31/145 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2163
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900