Protein Alignment Nelf-E and Nelfe

DIOPT Version :10

• Sequence 1: NP_648241.1
• Gene: Nelf-E / 38982
• FlyBaseID: FBgn0017430
• Length: 280
• Species: Drosophila melanogaster
• Sequence 2: NP_997713.1
• Gene: Nelfe / 294258
• RGDID: 1303325
• Length: 369
• Species: Rattus norvegicus
• Alignment Length: 375
• Identity: 105/375 - (28%)
• Similarity: 163/375 - (43%)
• Gaps: 115/375 - (30%)

  Fly     7 PNNLTEEEQMLQAKYQKLKKKKKALQAHK-------APKPEPESSLTLKRPTDARDAREVARKLI 64
            |..|:|||:.||.|:.|||||||||.|.|       |.:...:.||:.:...|...|.|.|::|:
  Rat     5 PPGLSEEEEALQKKFNKLKKKKKALLALKKQSSSGTASQGGVKRSLSEQPVVDTATATEQAKQLV 69

  Fly    65 KSGAIPAIQKQTKQDQTSFKRPKGQERAKRSTSETTVASYQPF--SSTQNDVAQETIISEIIKEE 127
            |||||.||:.:||  .:.|||.:..|...:...:..|.::|||  |.:.::..||.      ...
  Rat    70 KSGAISAIKAETK--NSGFKRSRTLEGKLKDPEKGPVPTFQPFQRSMSADEDLQEP------SRR 126

  Fly   128 PRRQNLYQHFATERDR-----------EERGMPEKVP-------------MDTAQPEK------- 161
            |:|::||:.|.:..||           |..|..|..|             ..:|.|.:
  Rat   127 PQRKSLYESFVSSSDRLRELGQDGEEAEAPGAGEGPPRGFDWSYEEHSGARSSASPPRSRSRDRS 191

  Fly   162 ----------------------------------------------------------------P 162
                                                                            |
  Rat   192 HDRSRDRDRDKERDRDRDRDRERDKDKDRDRDRDRDKERDRDRDRERDREGPFRRSDSFPERRAP 256

  Fly   163 RAGNTIFVSGNKVTEDFLKKTFNDYGTIVNVSMEIEKSRGFVSFAKPESADRAIAEIHGKNVNGI 227
            |.|||::|.|..:|...|:..|:.:|.|:::||:..::..||::.|.||||:|:||::|..|..:
  Rat   257 RKGNTLYVYGEDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESV 321

  Fly   228 NLQVQLARRQPQIEPINDASSSAVWSSIAASKSQKGSHKDHREMVQYDED 277
            .|:|.:||:||.::.   |:..:||.|:|...|.||.|:|.|..:.|.:|
  Rat   322 QLKVNIARKQPMLDA---ATGKSVWGSLAVQNSPKGCHRDKRTQIVYSDD 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nelf-E	NP_648241.1	RRM_NELFE	162..236	CDD:409746	29/73 (40%)
Nelfe	NP_997713.1	RRM_NELFE	256..330	CDD:409746	29/73 (40%)