DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6638 and gcdha

DIOPT Version :10

Sequence 1:NP_648239.1 Gene:CG6638 / 38979 FlyBaseID:FBgn0035911 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_957180.1 Gene:gcdha / 393860 ZFINID:ZDB-GENE-040426-1855 Length:441 Species:Danio rerio


Alignment Length:383 Identity:109/383 - (28%)
Similarity:179/383 - (46%) Gaps:20/383 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LDEDRQKLREVAFNFFQKELAPLAKEIDKLDNFKDMRPFWKKLGALGFLGITAEPDFGGTGGSYL 103
            |.|:...:|:....:.:.:|.|.....::.::|.  |....::|.||.||.|.: .:|..|.||:
Zfish    63 LTEEEIMIRDSFRTYCEDKLMPRIIMANRNEHFH--REILNEMGELGVLGPTIQ-GYGCAGTSYV 124

  Fly   104 DHCIIMEEFSRAAGGVALSYGAHSNLCINQLTKNGTPEQKEKYLPKLCSGEHVGGLAMSEPGAGS 168
            .:.:|..|..|...|........|:|.::.:...||.|||:||||||..||.:|...::||..||
Zfish   125 AYGLIAREVERVDSGYRSVMSVQSSLVMHPINAYGTEEQKQKYLPKLARGEILGCFGLTEPNHGS 189

  Fly   169 DVVSMKLRAERKGDY------YVLNGSKFWITNGSDADTLIVYAKTGGSGVPDKHGITAFIVETA 227
            |...|    |.|..|      |.::|:|.||||...||..:|:||.      :...:..|::|..
Zfish   190 DPAGM----ETKAKYNPSSRTYSISGTKTWITNSPYADICVVWAKC------EDGKVRGFVLERG 244

  Fly   228 WEGFSVAQKLDKLGMRGSSTCELVFQDLKVPAKNILGQENRGVYVLMSGLDFERLVLAAGPVGLM 292
            .:|.|..:...|..:|.|:|..:|..:::||.:|:|...: |:......|:..|..:|.|.:|..
Zfish   245 MKGLSTPKIEGKFSLRASATGMIVMDEVEVPEENLLPHVS-GLAGPFGCLNNARFGIAWGALGAA 308

  Fly   293 QAACDVAFDYAHQRKQMNKLIGEFQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRSPKDCAGV 357
            :.....|..|...|.|....:...||:|.|||||.|.::........:.|..|....:|:..:.:
Zfish   309 EFCFHAARQYTMDRIQFGVPLARNQLIQKKMADMLTEITIGLQSCLQLGRLIDQKKHTPEMISLL 373

  Fly   358 ILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEIRRWLIGRQL 415
            ...:..||..:|..|..:|||||..:|....|.:.:.:......||.:|...::||.:
Zfish   374 KRNSCGKALDIARQARDMLGGNGIADEYHIIRHVMNLEAVNTYEGTHDIHALILGRAI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6638NP_648239.1 IVD 38..417 CDD:173845 109/383 (28%)
gcdhaNP_957180.1 GCD 51..437 CDD:173840 109/383 (28%)

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