DRSC/TRiP Functional Genomics Resources

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Protein Alignment foi and Slc39a4

DIOPT Version :9

Sequence 1:NP_001261584.1 Gene:foi / 38976 FlyBaseID:FBgn0024236 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_001071137.2 Gene:Slc39a4 / 300051 RGDID:1306701 Length:657 Species:Rattus norvegicus


Alignment Length:766 Identity:183/766 - (23%)
Similarity:286/766 - (37%) Gaps:257/766 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RLHCQD-------HIES--LLGPARVTTHNSQDQLNARVYTNLS---------PSSETTDRRQQR 64
            |:||.|       .:|:  .||.........:..|.:|..|.||         |.....|.|...
  Rat    54 RVHCTDGPCEKCLSVETALALGKPDKPQLAPESVLESRYITYLSAAAALYLNDPEKTCKDIRAGL 118

  Fly    65 SASGDDDTFNYSISPPSRR-------EKRHAGHEHGPTSESR---VPQITQYYLEKLMAQ----- 114
            .||..||......||.:..       :|..|.....||.|..   |||:.:...|..:::     
  Rat   119 LASHVDDYLAKLESPEAMTLGLSQLLQKIEAHDASQPTREETCVDVPQLLEEAEEAGVSRSPGLV 183

  Fly   115 -----DELMNSSGFDGL-----LQQLSLHSLASGASEGTCVPGSRLVHHV----QPHDHH----- 160
                 |.::|.|.|.||     ........|:|.....|......|:||:    :.|..|     
  Rat   184 LTALLDHVLNGSCFQGLPSPQYFVDFVFRQLSSKPRNITLPELEDLMHHLGVGGEDHSDHGDHVD 248

  Fly   161 HAHHHEEEDHSLQLNNCTLIQNGTTSNVICPSLPNNNTHPLGKEAKNFTLSDKDLLHLCPILLYE 225
            |:|...|.:|.....:.|...:.:..:.:|                   ||.||::     .:|.
  Rat   249 HSHLDREANHQDSELHATHNSSSSVWDTLC-------------------LSAKDVM-----AVYG 289

  Fly   226 LKAQSGGCIEP---AILSDIDTTEELLEAEKDKDIFYV---------WIY---AFISVFACGILG 275
            |..::|  :.|   |.|:.....::|.||.....|.:|         ::|   |.:.:..|.:.|
  Rat   290 LSEEAG--VSPQAWAQLTPALVQQQLSEACSSSPIIHVQDQLSQAERYLYGSLATLLICLCAVFG 352

  Fly   276 LVGVAIIPFMGSRYYKYIIQYLVALAVGTMTGDALLHLLP-----HSLAGQ----DERGM----I 327
            |:.:.......:.:  ||:|..::||||.:||||||||:|     |:.:|:    :|..:    .
  Rat   353 LLLLTCAKCSTATH--YIMQTFLSLAVGALTGDALLHLIPKVLGLHTHSGEVHSHEEESIGGQST 415

  Fly   328 MKGLGCLGGIIFFYVMEHALTMISEWRKSVEKKETKKPSRAKVMRDPDSSVNNSVAGDKICKQKY 392
            .:.|..|||...|::.|....::                   :.||.|..               
  Rat   416 WRLLAVLGGFYIFFLFESFFNLL-------------------LPRDQDHE--------------- 446

  Fly   393 SSYPYCYDEITMNNKQSEWMHLPFDVAAGAGGDAPSVAELRNGVGDHDGSNDMAAAAESLISPLH 457
                                                    ::|...|.|               |
  Rat   447 ----------------------------------------KDGPCSHGG---------------H 456

  Fly   458 TNCVEMNHHNHNHKHNSHQQNHEGQDSNTIVTDLDGNAVYAVNKAKDKDSRNDHVTVILREHESS 522
            ::.:.:.....|.:.:  :|.||                         .||:|.||         
  Rat   457 SHGISLQLSPSNLRQS--KQPHE-------------------------SSRSDLVT--------- 485

  Fly   523 HHGHSHRHGHVHSPPETLS-----------AVAWMIIMGDGLHNFTDGMAIGAAFAENIAGGFST 576
                       ...||.|:           .:.::|.:||.:|||.||:|:||||:.....|.:|
  Rat   486 -----------EETPELLNPDTRRLRAELRMLPYLITLGDAVHNFADGLAVGAAFSSTWKTGLAT 539

  Fly   577 SLAVFCHELPHELGDFAILIKAGMSVKSAVYYNLLTGVLSFIGMIFGIAFGQSQDVAQWMFAVAA 641
            |||||||||||||||||.|:.||::||.|:..||.:.:.:|.|:...:|.|..::...|:.|||.
  Rat   540 SLAVFCHELPHELGDFAALLHAGLTVKRALLLNLASALTAFAGLYVALAVGVGEEGETWILAVAT 604

  Fly   642 GLFIYIALVDMMPEIS--ASHKSLGQFLLQILGMLSGVGIMLLIALYEGDL 690
            |||:|:||.||:|.:.  ...:....|||..:|:|.|..|:||::|||..:
  Rat   605 GLFLYVALCDMLPAMMNVRDQRPWLLFLLHNVGLLGGWTILLLLSLYEDSI 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
foiNP_001261584.1 Zip 258..684 CDD:280666 116/463 (25%)
Slc39a4NP_001071137.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337040
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0428
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D657777at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12191
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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