DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment foi and Slc39a12

DIOPT Version :9

Sequence 1:NP_001261584.1 Gene:foi / 38976 FlyBaseID:FBgn0024236 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_038951487.1 Gene:Slc39a12 / 291328 RGDID:1309305 Length:706 Species:Rattus norvegicus


Alignment Length:684 Identity:154/684 - (22%)
Similarity:266/684 - (38%) Gaps:209/684 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LCAHRLHCQD-----HIESLLGPAR------VTTHNSQDQL-NARVY--TNLSPSSETTDRRQQ- 63
            :|:.:|:..:     ::.|||...:      ::...:.|.| :.|.|  |:.||..||...::: 
  Rat   127 ICSSKLNMSNREYEFYLHSLLSLRQDEDSYFLSEKETDDILASTRKYFGTSTSPCMETKILQRES 191

  Fly    64 --RSASGDDDTFNYSISPPSRREKRHA---GHEHGPTSESRVPQITQYYLEKLMAQDELMNSSGF 123
              :|::|.|:.....::..........   |.:..|:     |.....|:...:.:...::.|..
  Rat   192 GIQSSNGADEKMLPQLAATIIALSLQGVCLGRKDSPS-----PDDFTEYIFSFLNRTNALHLSEL 251

  Fly   124 DGLLQQLSLHSLASGASEGTCVPGSRL----------VHHVQPHDHHHAHHHEEEDHSLQLNNCT 178
            :.||..||        :...|...:.|          ||.::......|......|||:..:...
  Rat   252 EELLNMLS--------TRRACTKINTLHEHQRKQNTAVHGLRDPKSAAAMDKVSGDHSVSWDQAC 308

  Fly   179 LIQNGTTSNVICPSLPNNNTHPLGKEAKNFTLSDKDLLHLCPILLYELKAQSGGCIEPAILSDID 243
            .    :...::...|.|:::..:.||         |...|.|.::.:|.:.|  |..|   .|..
  Rat   309 F----SAQQLVEIFLQNHSSLSISKE---------DFKQLSPGIIQQLLSCS--CQVP---RDQK 355

  Fly   244 TTEELLEAEKDKDIFYVWIYAFISVFACGILGLVGVAIIPFMG-SRYYKYIIQYLVALAVGTMTG 307
            ........||       :.|:.::|....:..::|.|::.|.. ...|..|:|..|.|||||::|
  Rat   356 AKPPPTTLEK-------YGYSTVAVTLLTLGSMLGTALVLFHSCEENYSLILQLFVGLAVGTLSG 413

  Fly   308 DALLHLLPHSLA----------GQDERGMIMKGLGCLGGIIFFYVMEHALTMISEWRKSVEKKET 362
            ||||||:|..|.          ..:.:..|.|.||.||||..|:::|....::            
  Rat   414 DALLHLIPQVLGLHKQEAELGHFHESQSPIWKLLGLLGGIHGFFLIEKCFILL------------ 466

  Fly   363 KKPSRAKVMRDPDSSVNNSVAGDKICKQKYSSYPYCYDEITMNNKQSEWMHLPFDVAAGAGGDAP 427
                                                   ::.|.|     .||            
  Rat   467 ---------------------------------------VSPNTK-----GLP------------ 475

  Fly   428 SVAELRNGVGDHDGSNDMAAAAESLISPLHTNCV----EMNHHNHNHKHNSHQQNHEGQDSNTIV 488
                |.||   |.|               ||:.:    |:|..:...|..|..|....:||.|  
  Rat   476 ----LVNG---HAG---------------HTHHLGLSPELNDQSGGGKSISTIQLKGPEDSQT-- 516

  Fly   489 TDLDGNAVYAVNKAKDKDSRNDHVTVILREHESSHHGHSHRHGHVHSPPETLSAVAWMIIMGDGL 553
            .:|....|.|.|:.:                                  :|:|.:|.|:::||||
  Rat   517 AELPKGNVPASNRNR----------------------------------KTISLLAVMVLVGDGL 547

  Fly   554 HNFTDGMAIGAAFAENIAGGFSTSLAVFCHELPHELGDFAILIKAGMSVKSAVYYNLLTGVLSFI 618
            |||.||:.||.||:.::..|.:|::|:.|||:|||:||||:|:.:|:|:::|:..|.|:.:.:||
  Rat   548 HNFADGLVIGTAFSSSLESGVTTTIAILCHEIPHEMGDFAVLLSSGLSIRTAILMNFLSALTAFI 612

  Fly   619 GMIFGIAFGQSQDVAQWMFAVAAGLFIYIALVDM 652
            |:..|::......|..|:..|.||:|:|::||.|
  Rat   613 GLYIGLSVSADPRVQDWILTVTAGMFLYLSLVGM 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
foiNP_001261584.1 Zip 258..684 CDD:280666 106/410 (26%)
Slc39a12XP_038951487.1 ZIP4_domain 62..221 CDD:408101 17/93 (18%)
Zip 368..646 CDD:396884 105/403 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0428
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D657777at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12191
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.