DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment foi and slc39a8

DIOPT Version :9

Sequence 1:NP_001261584.1 Gene:foi / 38976 FlyBaseID:FBgn0024236 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_002934812.2 Gene:slc39a8 / 100487145 XenbaseID:XB-GENE-1011741 Length:459 Species:Xenopus tropicalis


Alignment Length:605 Identity:146/605 - (24%)
Similarity:232/605 - (38%) Gaps:203/605 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 MAQDELMNSSGFDGLLQQLSLHSLASGASEGTCVPGSRLVHHVQPHDHHHAHHHEEEDHSLQLNN 176
            |...:::...|.||.|...::..|.:|     |.....|      |:..|.|:          |.
 Frog    29 MFTQDILQLYGHDGRLSSSNVSRLMNG-----CDARDEL------HNLEHLHY----------NR 72

  Fly   177 CTLIQNGTTSNVICPSLPNNNTHPLGKEAKNFTLSDKDLLHLCPILLYELKAQSGGCIEPAIL-S 240
            |.     :|.::.  |:.|         .||..:::......||.:|:::      ...|... |
 Frog    73 CL-----STEDIF--SIYN---------IKNDQITNVTFETFCPAILHQI------FFHPCTFES 115

  Fly   241 DIDTTEELLEAEKDKDIFYVWIYAFISVFACGILGLVGVAIIPFMGSRYYKYIIQYLVALAVGTM 305
            ..::|:....|:       ||.::|:||....:..|:|:.|.|.:...|:..|:.|.|.||:||:
 Frog   116 QDESTQRPSPAQ-------VWGFSFLSVTIINLTSLLGLFITPLIKKPYFPKILTYFVGLAIGTL 173

  Fly   306 TGDALLHLLPHSLAGQDER--GMIMKGLGCLGGIIFFYVMEHALTMISEWRKSVEKKETKKPSRA 368
            ..:|:..|:|.:. |.|.:  ..:.|.:...||......:|..|.:|.                 
 Frog   174 FSNAIFQLIPEAF-GFDPKVDNYVPKAVAIFGGFYILLFVERLLKLIL----------------- 220

  Fly   369 KVMRDPDSSVNNSVAGDKICKQKYSSYPYCYDEITMNNKQSEWMHLPFDVAAGAGGDAPSVAELR 433
                        ::.|:.:                       ..||..|                
 Frog   221 ------------NIYGEGV-----------------------HTHLEID---------------- 234

  Fly   434 NGVGDHDGSNDMAAAAESLISPLHTNCVEMNHHNHNHKHNSHQQNHEGQDSNTIVTDLDGNAVYA 498
                                                  |..||:.|....:|.|.   :||.:|:
 Frog   235 --------------------------------------HVPHQEFHIESPANKIP---NGNIIYS 258

  Fly   499 ---------VN-----KAKDKDSRND-HVTVILREHESSHHGHSHRHGHVHSPPETLSAVAWMII 548
                     ||     |...||:..: :...:|:                ..|.:::..:||||.
 Frog   259 NPAVAEVNGVNHLDNIKVSSKDAVEEVYCCKVLK----------------WRPLKSIGTLAWMIT 307

  Fly   549 MGDGLHNFTDGMAIGAAFAENIAGGFSTSLAVFCHELPHELGDFAILIKAGMSVKSAVYYNLLTG 613
            :.|.||||.||:||||:|..::..|.|||:|:.|.|.|||.|||||||.||||:..|:.:|.|:.
 Frog   308 LSDALHNFIDGLAIGASFTLSVLQGLSTSIAILCEEFPHEFGDFAILINAGMSIPQALTFNFLSA 372

  Fly   614 VLSFIGMIFGIAFGQSQDVAQWMFAVAAGLFIYIALVDMMPE--------ISASHKSLGQFLLQI 670
            ...:||::|||..|.:.: ...:||:|.|:|:||.|.||.||        |......|..|.:|.
 Frog   373 CSCYIGLVFGILVGNNFE-PSIIFAIAGGMFLYIGLADMFPELNEMLKDKIKGRRSDLIYFSIQN 436

  Fly   671 LGMLSGVGIMLLIALYEGDL 690
            .|:|||..|:|||.||..::
 Frog   437 AGLLSGFAIILLITLYSKEI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
foiNP_001261584.1 Zip 258..684 CDD:280666 117/450 (26%)
slc39a8XP_002934812.2 Zip 128..450 CDD:396884 117/448 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D657777at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4006
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

Return to query results.
Submit another query.