DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstO1 and se

DIOPT Version :9

Sequence 1:NP_648237.1 Gene:GstO1 / 38975 FlyBaseID:FBgn0035907 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster


Alignment Length:248 Identity:131/248 - (52%)
Similarity:172/248 - (69%) Gaps:5/248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSNTQHLTIGSPKPVFPDDGILKLYSMRFCPYAHRVHLVLDAKKIPYHAIYINLRDKPEWFSLVS 65
            |||.:||..|||.|..|:||||:||||||||:|.|||||||||:||||:|||||.|||||....:
  Fly     1 MSNGRHLAKGSPMPDVPEDGILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEKN 65

  Fly    66 SSTKVPALELVKEQGNPVLIESLIICDYLDEKYPEVPLYPKDLLKKAQEKILIERFGQFINAFYY 130
            ...||||||:|:|.|.|||.|||:||:||||:||..||||:|.|||.|:|:|||||...:.||:.
  Fly    66 PQGKVPALEIVREPGPPVLTESLLICEYLDEQYPLRPLYPRDPLKKVQDKLLIERFRAVLGAFFK 130

  Fly   131 LLLHDNPEQLVDTDHYAGLVVYEEELKRRCTKFFGGDSPGMLDYMMWPWCERFDSLKYTFEQKFE 195
            .....:.|..     ::||.:||.||.||.|:||||:..|:||||:||||||.:.||....:.:.
  Fly   131 ASDGGDLEPF-----WSGLDIYERELARRGTEFFGGEQTGILDYMIWPWCERLELLKLQRGEDYN 190

  Fly   196 LSPERFPTLIKWRDLMIQDRAVKCFYLDGQTHAKYMNSRRSGQADYNMLYNEA 248
            ....|||.|..|.:.|.:|.||..||::.:..|:::.:|..|:.:||:|..:|
  Fly   191 YDQSRFPQLTLWLERMKRDPAVMAFYMEAEVQAEFLRTRSLGRPNYNLLVKDA 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstO1NP_648237.1 Thioredoxin_like 3..95 CDD:294274 62/91 (68%)
GstA 22..216 CDD:223698 107/193 (55%)
GST_C_Omega 109..234 CDD:198293 51/124 (41%)
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 62/91 (68%)
GstA 22..215 CDD:223698 109/197 (55%)
GST_C_Omega 109..229 CDD:198293 51/124 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449069
Domainoid 1 1.000 63 1.000 Domainoid score I3713
eggNOG 1 0.900 - - E1_KOG0406
Homologene 1 1.000 - - H37971
Inparanoid 1 1.050 83 1.000 Inparanoid score I2350
Isobase 1 0.950 - 0.71939 Normalized mean entropy S4834
OMA 1 1.010 - - QHG48297
OrthoDB 1 1.010 - - D1225872at2759
OrthoFinder 1 1.000 - - FOG0001358
OrthoInspector 1 1.000 - - mtm6382
orthoMCL 1 0.900 - - OOG6_100366
Panther 1 1.100 - - P PTHR43968
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X130
1413.760

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