DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstO1 and Gstt3

DIOPT Version :9

Sequence 1:NP_648237.1 Gene:GstO1 / 38975 FlyBaseID:FBgn0035907 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_598755.1 Gene:Gstt3 / 103140 MGIID:2143526 Length:241 Species:Mus musculus


Alignment Length:243 Identity:61/243 - (25%)
Similarity:92/243 - (37%) Gaps:76/243 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VHLVLDAKKIPYHAIYI---------NLR--------DKPEWFSLVSSSTKVPALELVKEQGNPV 83
            :.|.||....|..|:||         .||        ...:.|:.|:...|||||    :.|:.|
Mouse     3 LELYLDLMSQPCRAVYIFAKKNGIPFQLRTIELLKGQQYTDSFAQVNPLRKVPAL----KDGDFV 63

  Fly    84 LIESLIICDYLDEKYPEVP--LYPKDLLKKAQ---------------------EKILIERF-GQF 124
            |.||:.|..||..|| :.|  .||:||..:|:                     :|::...| ||.
Mouse    64 LAESVAILLYLSRKY-KAPDHWYPQDLQTRARVDEYLAWQHTALRSCCTRAMWQKMMFPVFLGQP 127

  Fly   125 INAFYYLLLHDNPEQLVDT--DHYAGLVVYEEELKRRCTKFFGGDSPGMLDY-----MMWP---W 179
            :          .||.|..|  :....|.|.|::..|. ..|..|....:.|.     :|.|   .
Mouse   128 V----------PPEMLASTLAELDGCLQVLEDKFLRN-QAFLTGSHISVADLVAITELMHPVSAG 181

  Fly   180 CERFDSLK--YTFEQKFE------LSPERFPTLIKWRDL-MIQDRAVK 218
            |:.|:|..  ..:.|:.|      |..|....::|.:|: .:.|.|:|
Mouse   182 CKIFESRPKLAAWRQRVEAEVGESLFQEAHEVVLKAKDMPPLMDPALK 229

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstO1NP_648237.1 Thioredoxin_like 3..95 CDD:294274 23/75 (31%)
GstA 22..216 CDD:223698 59/239 (25%)
GST_C_Omega 109..234 CDD:198293 30/151 (20%)
Gstt3NP_598755.1 GstA 3..217 CDD:223698 56/229 (24%)
GST_N_Theta 3..78 CDD:239348 24/78 (31%)