DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstO1 and tlr12

DIOPT Version :10

Sequence 1:NP_648237.1 Gene:GstO1 / 38975 FlyBaseID:FBgn0035907 Length:254 Species:Drosophila melanogaster
Sequence 2:XP_002941870.2 Gene:tlr12 / 100498493 XenbaseID:XB-GENE-5824069 Length:936 Species:Xenopus tropicalis


Alignment Length:133 Identity:28/133 - (21%)
Similarity:47/133 - (35%) Gaps:34/133 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YSMRFCPYAHRVHLVLDAKKIPYHAIYINLRDKPEWFSLVSSSTKVPA--------LELVKEQGN 81
            ::::.|..|.|..|:.|    |..|...:|.......:|..:.|.:.|        :.::...|:
 Frog    31 WTVKKCNVADRSMLLRD----PMFATRCSLYKNATSLALCGNITNITADISDVPSTINILCLSGS 91

  Fly    82 PVLIESLIICD-----YLDEKYPEVPLYP---KDLLKKAQEKILIERFGQ------------FIN 126
            ...|......:     ||..|.|.|.:||   |.|  ::.|.:.|...|.            |.|
 Frog    92 NTFIPGGTFANFKRIKYLFMKMPLVRIYPNAFKGL--ESLESLAISFLGHSKCNNLSIPTDAFSN 154

  Fly   127 AFY 129
            .:|
 Frog   155 LYY 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstO1NP_648237.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 3..95 CDD:469754 14/82 (17%)
GST_C_Omega 109..234 CDD:198293 6/33 (18%)
tlr12XP_002941870.2 leucine-rich repeat 60..82 CDD:275380 3/21 (14%)
leucine-rich repeat 83..105 CDD:275380 2/21 (10%)
leucine-rich repeat 106..128 CDD:275380 9/23 (39%)
leucine-rich repeat 182..207 CDD:275380
leucine-rich repeat 208..233 CDD:275380
LRR 226..633 CDD:443914
leucine-rich repeat 234..279 CDD:275380
leucine-rich repeat 308..331 CDD:275380
leucine-rich repeat 332..355 CDD:275380
leucine-rich repeat 356..382 CDD:275380
leucine-rich repeat 383..406 CDD:275380
leucine-rich repeat 407..430 CDD:275380
leucine-rich repeat 431..454 CDD:275380
leucine-rich repeat 455..478 CDD:275380
TIR 788..930 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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