DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstO2 and Gstt2

DIOPT Version :9

Sequence 1:NP_729388.1 Gene:GstO2 / 38974 FlyBaseID:FBgn0035906 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_036928.1 Gene:Gstt2 / 29487 RGDID:69362 Length:244 Species:Rattus norvegicus


Alignment Length:229 Identity:47/229 - (20%)
Similarity:71/229 - (31%) Gaps:84/229 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PFSHRVRLMLAAKHIEHHKIYVDLIEKPEWYKDFSPLGKVPALQLTGVKDQP-TLVESLIIAEYL 95
            ||..|...:|..:|:.            |.:...:.|.|||.|     ||.. .|.||..|..||
  Rat    27 PFQLRTVDLLKGQHLS------------EQFSQVNCLKKVPVL-----KDGSFVLTESTAILIYL 74

  Fly    96 DQQYP-QTRLFPTDPLQKALDKILIERFAPVVSAIYPVL----TCNP----NAPKDAIPNFENAL 151
            ..:|. ....:|.|...:|.....:...|..:...:.||    ...|    ..|::.:....|::
  Rat    75 SSKYQVADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPEEKVERNRNSM 139

  Fly   152 --------DVFEVELGKRGTPYFAGQHIGIVDYMIWPWFERFPSMKINTEQKYELDTKRFEKLLK 208
                    |.|     .|...:.|||.:.:.                                  
  Rat   140 VLALQRLEDKF-----LRDRAFIAGQQVTLA---------------------------------- 165

  Fly   209 WRDLMTQDEVVQKTALDVQLHAEFQKSKTLGNPQ 242
              |||:.:|::|..||...|   |:     |.||
  Rat   166 --DLMSLEELIQPVALGCNL---FE-----GRPQ 189

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstO2NP_729388.1 Thioredoxin_like 5..96 CDD:294274 18/64 (28%)
GstA 25..215 CDD:223698 38/200 (19%)
GST_C_Omega 110..235 CDD:198293 22/140 (16%)
Gstt2NP_036928.1 GST_N_Theta 3..78 CDD:239348 19/67 (28%)