DRSC/TRiP Functional Genomics Resources

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Protein Alignment se and yibF

DIOPT Version :10

Sequence 1:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_418049.1 Gene:yibF / 948113 ECOCYCID:EG11762 Length:202 Species:Escherichia coli


Alignment Length:132 Identity:35/132 - (26%)
Similarity:56/132 - (42%) Gaps:19/132 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEKNPQGKVPALEIVREPGPPVLTE 86
            ::|......||.:::.::|..|.|.:..|.....:....:.:.||.||||.|  |.|.| ....:
E. coli     1 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVL--VTEEG-ECWFD 62

  Fly    87 SLLICEYLDEQYPLRPLYPRDPLKKVQDKLLIERFRAVLGAFFKASDGGDLEPFWSGLDIYEREL 151
            |.:|.||::.......:.|||||    :.|.:.:..|:......|           || :..||.
E. coli    63 SPIIAEYIELMNVAPAMLPRDPL----ESLRVRKIEALADGIMDA-----------GL-VSVREQ 111

  Fly   152 AR 153
            ||
E. coli   112 AR 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 21/72 (29%)
GST_C_Omega 109..229 CDD:198293 10/45 (22%)
yibFNP_418049.1 PRK10357 1..202 CDD:182405 35/132 (27%)

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