DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment se and GSTO1

DIOPT Version :9

Sequence 1:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_004823.1 Gene:GSTO1 / 9446 HGNCID:13312 Length:241 Species:Homo sapiens


Alignment Length:219 Identity:95/219 - (43%)
Similarity:124/219 - (56%) Gaps:16/219 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGRHLAKGSPMPDVPEDGILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEKNPQ 67
            :.|.|.|||..|....:|.:|:|||||||||:|..|||.||.|.:..|.|||.:||||..:|||.
Human     5 SARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPF 69

  Fly    68 GKVPALEIVREPGPPVLTESLLICEYLDEQYPLRPLYPRDPLKKVQDKLLIERFRAV---LGAFF 129
            |.||.||  ...| .::.||.:.||||||.||.:.|.|.||.:|...|:::|.|..|   :|:|.
Human    70 GLVPVLE--NSQG-QLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFI 131

  Fly   130 KASDGGDL----EPFWSGLDIYERELARRGTEFFGGEQTGILDYMIWPWCERLELLKLQRGEDYN 190
            ::.:..|.    |.|.......|..|..:.|.||||....::||:||||.||||.:||....|:.
Human   132 RSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNECVDHT 196

  Fly   191 YDQSRFPQLTLWLERMKRDPAVMA 214
                  |:|.||:..||.||.|.|
Human   197 ------PKLKLWMAAMKEDPTVSA 214

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 46/91 (51%)
GstA 22..215 CDD:223698 88/200 (44%)
GST_C_Omega 109..229 CDD:198293 40/113 (35%)
GSTO1NP_004823.1 GST_N_Omega 5..94 CDD:239353 46/91 (51%)