DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment se and gsto1

DIOPT Version :10

Sequence 1:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001011256.1 Gene:gsto1 / 496704 XenbaseID:XB-GENE-5771576 Length:241 Species:Xenopus tropicalis


Alignment Length:238 Identity:88/238 - (36%)
Similarity:133/238 - (55%) Gaps:17/238 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RHLAKGSPMPDVPEDGILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEKNPQGK 69
            :.||||||.|....||::|.|.|||||||||.||:|.||.|.:..:|||..:||:|..||:|.|:
 Frog     6 KSLAKGSPAPGPVPDGVIRAYIMRFCPFAQRAHLILVAKGIKHELVYINTLNKPDWFFEKSPFGQ 70

  Fly    70 VPALEIVREPGPPVLTESLLICEYLDEQYPLRPLYPRDPLKKVQDKLLIERFR-------AVLGA 127
            |||:|..:   ..::.||.::|:||||.:|.:.|.|:||.:|.|.|:|:|.|.       .::||
 Frog    71 VPAIETSK---GQLIYESQIVCDYLDEVFPGKKLTPQDPFQKAQQKMLLEHFSKASTVAFKIVGA 132

  Fly   128 FFKASDGGDLE-PFWSGLDIYERELARRGTEFFGGEQTGILDYMIWPWCERLELLKLQRGEDYNY 191
            .....|...|: .|...|..:::.:|:..|.:.||....:.||||.|..||.::..::...:   
 Frog   133 KKNNEDISALKAEFLEKLVQFDQVVAKLNTPYVGGSSVSMADYMILPIFERFDIFGVKDCLE--- 194

  Fly   192 DQSRFPQLTLWLERMKRDPAVMAFYMEAEVQAEFLRTRSLGRP 234
               :.|.|..|.:.|.:||||.|.:::.|....|.:....|.|
 Frog   195 ---KTPHLLQWYQLMLQDPAVKATHIKPEALEGFFKLYLQGNP 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 44/89 (49%)
GST_C_Omega 109..229 CDD:198293 34/127 (27%)
gsto1NP_001011256.1 GST_N_Omega 6..93 CDD:239353 44/89 (49%)
GST_C_Omega 107..229 CDD:198293 34/127 (27%)

Return to query results.
Submit another query.