DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment se and gsto2

DIOPT Version :9

Sequence 1:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001007373.1 Gene:gsto2 / 492500 ZFINID:ZDB-GENE-041114-67 Length:240 Species:Danio rerio


Alignment Length:247 Identity:95/247 - (38%)
Similarity:135/247 - (54%) Gaps:31/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GRHLAKGSPMPDVPEDGILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEKNPQG 68
            |:..:...|:|    :|.:|||||||||||||..|||.||.:.:..|.|||..||:|.|:|||.|
Zfish     9 GKECSAPGPVP----NGQIRLYSMRFCPFAQRTRLVLTAKGVKHDIININLVSKPDWFLKKNPFG 69

  Fly    69 KVPALEIVREPGPPVLTESLLICEYLDEQYPLRPLYPRDPLKKVQDKLLIERFRAVLGAFFKASD 133
            .||.||   .....|:.||.:.||||||.||.:.|.|.||.::.|.|:|:|.:..|:..|:|.|.
Zfish    70 TVPVLE---TSSGQVIYESPITCEYLDEVYPEKKLLPSDPFERAQQKMLLELYSKVIPYFYKISM 131

  Fly   134 GGDLEPFWSGLDIYERE-------------LARRGTEFFGGEQTGILDYMIWPWCERLELLKLQR 185
            |..     .|.|:...|             ||.:.|::|||:...::||:||||.||.|::.:: 
Zfish   132 GKK-----RGEDVSTAEAEFTEKLLQLNEALANKKTKYFGGDSITMIDYLIWPWFERAEMMGVK- 190

  Fly   186 GEDYNYDQSRFPQLTLWLERMKRDPAVMAFYMEAEVQAEFLRTRSLGRPNYN 237
                 :..::.|:|..|:|.|..||.|.|.....:|...|..:...|:|||:
Zfish   191 -----HCLAKTPELRKWIELMFEDPVVKATMFNTDVHKVFFDSYMDGKPNYD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 44/90 (49%)
GstA 22..215 CDD:223698 84/205 (41%)
GST_C_Omega 109..229 CDD:198293 38/132 (29%)
gsto2NP_001007373.1 GST_N_Omega 4..93 CDD:239353 44/90 (49%)
GstA 25..210 CDD:223698 80/198 (40%)
GST_C_Omega 107..229 CDD:198293 38/132 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7573
eggNOG 1 0.900 - - E1_KOG0406
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37971
Inparanoid 1 1.050 180 1.000 Inparanoid score I3986
OMA 1 1.010 - - QHG48297
OrthoDB 1 1.010 - - D1225872at2759
OrthoFinder 1 1.000 - - FOG0001358
OrthoInspector 1 1.000 - - mtm6382
orthoMCL 1 0.900 - - OOG6_100366
Panther 1 1.100 - - O PTHR43968
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16830
SonicParanoid 1 1.000 - - X130
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

Return to query results.
Submit another query.