DRSC/TRiP Functional Genomics Resources

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Protein Alignment se and gsto-2

DIOPT Version :9

Sequence 1:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_871705.3 Gene:gsto-2 / 353420 WormBaseID:WBGene00015337 Length:254 Species:Caenorhabditis elegans


Alignment Length:259 Identity:84/259 - (32%)
Similarity:131/259 - (50%) Gaps:39/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGRHLAKGSPMPDVPEDGILRLYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTDKPEWLLEKNPQ 67
            |.:.:..|.|.|..|..|.:|:|:||:||:|||..:....|:||...|.|:|..||:|...|:.:
 Worm     8 NTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWFFTKHYK 72

  Fly    68 GKVPALEIVREPGPPVLTESLLICEYLDEQYPLRPLYPRDPLKKVQDKLLIERFRAVLGAFF--- 129
            |:|||||  .:.|..::.||.:|.||||:.||...:.|.|..:|||.|||::|....|.:.|   
 Worm    73 GQVPALE--HDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDRISGQLSSAFYGV 135

  Fly   130 -KASDGGDLEPFWSGLDIYER--ELAR---------RGTEFFGGEQTGILDYMIWP------WCE 176
             :|:...||        :.|:  |||:         .|..:.|..:.|.:||:|:|      |..
 Worm   136 VQAAKISDL--------LKEKLVELAKAYDTAEELLTGDFYSGTSKPGFVDYLIYPNIQRAFWTS 192

  Fly   177 RLEL---LKLQRGEDYNYDQSRFPQLTLWLERMKRDPAVMAFYMEAEVQAEFLRTRSLGRPNYN 237
            .:..   ||::.....||     |:|:.|.:|:...|.|:|.....|...||.::..:|.||::
 Worm   193 HIIKDFPLKVESFPGPNY-----PKLSKWYKRLDSIPEVIATSQPTETAVEFFKSWIIGAPNFD 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 37/91 (41%)
GstA 22..215 CDD:223698 71/216 (33%)
GST_C_Omega 109..229 CDD:198293 38/143 (27%)
gsto-2NP_871705.3 Thioredoxin_like 8..98 CDD:294274 37/91 (41%)
GstA 29..224 CDD:223698 68/209 (33%)
GST_C_family 112..242 CDD:295467 38/142 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159277
Domainoid 1 1.000 74 1.000 Domainoid score I5948
eggNOG 1 0.900 - - E1_KOG0406
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37971
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.71939 Normalized mean entropy S4834
OMA 1 1.010 - - QHG48297
OrthoDB 1 1.010 - - D1225872at2759
OrthoFinder 1 1.000 - - FOG0001358
OrthoInspector 1 1.000 - - mtm4834
orthoMCL 1 0.900 - - OOG6_100366
Panther 1 1.100 - - O PTHR43968
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16830
SonicParanoid 1 1.000 - - X130
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.700

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