DRSC/TRiP Functional Genomics Resources

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Protein Alignment se and exl-1

DIOPT Version :10

Sequence 1:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_497000.1 Gene:exl-1 / 175100 WormBaseID:WBGene00001371 Length:238 Species:Caenorhabditis elegans


Alignment Length:104 Identity:26/104 - (25%)
Similarity:39/104 - (37%) Gaps:27/104 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 RELARRGTEFFGGEQT-----GILDYMIWPWCERLELLKLQRGEDYNYDQSR---FPQLTLWLER 205
            |.:.....|..|..||     .|||:        ||.||.:||:|...:.:.   |.|...:::.
 Worm    62 RRMPGISAEESGETQTFETEDDILDF--------LEYLKPERGDDEEAENATCDLFRQFARFVKD 118

  Fly   206 MK-RDPAVMAFYMEAEVQAEFLR-TRSLGRPNYNLLVKD 242
            :: ||.|         ...|.|| .:.|.......|:.|
 Worm   119 VEHRDTA---------FNTELLRLDKYLSEQETKFLISD 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seNP_648235.1 GST_N_Omega 3..95 CDD:239353
GST_C_Omega 109..229 CDD:198293 23/89 (26%)
exl-1NP_497000.1 GST_C_family 98..210 CDD:470672 12/60 (20%)
Blue background indicates that the domain is not in the aligned region.

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