DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment se and Gstt3

DIOPT Version :10

Sequence 1:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_598755.1 Gene:Gstt3 / 103140 MGIID:2143526 Length:241 Species:Mus musculus


Alignment Length:233 Identity:50/233 - (21%)
Similarity:76/233 - (32%) Gaps:69/233 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VHLVLDAKQIPYHSIYI--------------------NLTDKPEWLLEKNPQGKVPALEIVREPG 80
            :.|.||....|..::||                    ..||.   ..:.||..|||||    :.|
Mouse     3 LELYLDLMSQPCRAVYIFAKKNGIPFQLRTIELLKGQQYTDS---FAQVNPLRKVPAL----KDG 60

  Fly    81 PPVLTESLLICEYLDEQYPLRP-LYPRDPLKKVQ-DKLLIERFRAVLGAFFKASDGGDLEPFWSG 143
            ..||.||:.|..||..:|.... .||:|...:.: |:.|..:..|:.....:|.....:.|.:.|
Mouse    61 DFVLAESVAILLYLSRKYKAPDHWYPQDLQTRARVDEYLAWQHTALRSCCTRAMWQKMMFPVFLG 125

  Fly   144 LDIYERELAR-----------------RGTEFFGGEQTGILD--------YMIWPWCERLELLKL 183
            ..:....||.                 |...|..|....:.|        :.:...|:..|    
Mouse   126 QPVPPEMLASTLAELDGCLQVLEDKFLRNQAFLTGSHISVADLVAITELMHPVSAGCKIFE---- 186

  Fly   184 QRGEDYNYDQSRFPQLTLWLERMKRDPAVMAFYMEAEV 221
                      || |:|..|.:|::.:.....|....||
Mouse   187 ----------SR-PKLAAWRQRVEAEVGESLFQEAHEV 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 22/78 (28%)
GST_C_Omega 109..229 CDD:198293 23/139 (17%)
Gstt3NP_598755.1 GST_N_Theta 3..78 CDD:239348 23/81 (28%)
GST_C_Theta 92..216 CDD:198292 23/137 (17%)

Return to query results.
Submit another query.