DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6765 and rib

DIOPT Version :9

Sequence 1:NP_001261582.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster


Alignment Length:802 Identity:159/802 - (19%)
Similarity:253/802 - (31%) Gaps:337/802 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ENYHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQFFA 68
            :.|.|:|::|.|.|...:..|::...:.|..|.           :......||:.:|:|:|.:|.
  Fly    16 QTYCLRWNNHQTNLVQILHALHEVGSYVDCSLV-----------VDDEQFQAHRVVLAANSPYFQ 69

  Fly    69 TMFETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGL--- 130
            .:.:..|..:.:.:|     |.:....|..|:||||:||.||:.....|:||..:.|:::||   
  Fly    70 HILKDVPQDHCSIIL-----PGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDN 129

  Fly   131 ---------CRTSSSNGGG-----------SGSVVTTTHHPHSLAGHLHPREASTMYMSNGTRTA 175
                     ..||||..||           |.||::|       :.|:.|..|.:...|      
  Fly   130 LMKFNHASVTPTSSSGAGGAKPQNGSASNHSSSVIST-------STHISPSAAISSSCS------ 181

  Fly   176 LPPPPPPPQSTMSAQLQGDLYASKPGGSTRFALDHHHLSSHHSHLNHHNPQQQFRGLGASVMPK- 239
               ||||||           :..:||.|                   |.||||  .:.||.:|. 
  Fly   182 ---PPPPPQ-----------FGYQPGYS-------------------HYPQQQ--PMSASQIPAG 211

  Fly   240 DSPVI-------------------------------------------IKSPKLAAHTGLLTVAS 261
            ::|:.                                           :|..||:|.:.:|    
  Fly   212 EAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSML---- 272

  Fly   262 SSKLGISVNKEVAI--------DPEDKCCFAAPGQL-----ESQSHPPPPTTTTTTVGGGGG--- 310
                 :|.|::..|        :|.|.   :.||.:     ::.:||...|.....:|..||   
  Fly   273 -----LSGNRDTPILRNVLAQANPADS---SQPGPMNANGEKTPTHPHQNTQLPAGLGVSGGERN 329

  Fly   311 -SVGGSG-APPSQPISICTEVGCSSCPLTAGPGADQAETTLRRTEYEE-------QALRERNEVG 366
             |..||. ....:|:|..|:   .|.....|....:.....|..:|..       ||:||    |
  Fly   330 HSFNGSDYGGDKEPLSPYTD---RSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVRE----G 387

  Fly   367 LVFERRLRRESACERSRDY-------YEAPHFEHVVSSRLAATPPPPPQQAPPSHPPTLRHPHNF 424
            :         ||.:.||.|       |:.....::.:.|                 .|.|.|   
  Fly   388 M---------SALQASRKYGLPSRTLYDKVRKLNITTGR-----------------GTHRTP--- 423

  Fly   425 LTIKQEPTDWSNNPPNASSASNNNNLEELPLASPKQPLDFKMSAVKL--------------EVNR 475
                      ..:||.|.|:..                 |..||...              ||.|
  Fly   424 ----------KRSPPGAESSQG-----------------FSYSAAAAAAAHNYGHGHGHHSEVKR 461

  Fly   476 DR---GTPSEESEEHTLRDYNNFKQLLVCEICQKSFEDTKMLVRHLGTHAGDPTGGTERNLLPSS 537
            |:   ..|:......|:..  :...||          |...|.:.|....||..|   |..|.:.
  Fly   462 DQKVDHVPAHHGMPPTIPP--SAAALL----------DHAFLQQALENRGGDMAG---REALHAM 511

  Fly   538 ASGSTTSASSNLALRSVKTYVPKKRRRVSQQENNMD---HDHVTLLCDLCSTSFDTPAEWVRHMN 599
            |..:...|::|               |:|.....||   :.|          ...:|:...||..
  Fly   512 ALAAAAHAAAN---------------RLSSSPAEMDQRSNGH----------GMRSPSPQGRHYP 551

  Fly   600 SQHTEIELAM-------------------FNSKKDGEQ---------KGQQPP----PPPATS-- 630
            .:...::|.|                   .:.::|.||         :.::||    |.|..:  
  Fly   552 HEQEAMDLEMEKHEQNIIKRERDQDEREDADDEEDHEQEHVEDLSLARKERPPSPYSPQPTEAGA 616

  Fly   631 -----SSSTVSNSQMQPKYPSS 647
                 :||..:|.:....||||
  Fly   617 GVIMHASSASANGKDHVDYPSS 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6765NP_001261582.1 BTB 24..132 CDD:279045 28/119 (24%)
BTB 53..130 CDD:197585 23/76 (30%)
ribNP_001261085.1 BTB 33..133 CDD:279045 28/115 (24%)
BTB 44..133 CDD:197585 27/104 (26%)
HTH_psq 373..417 CDD:283007 11/56 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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