DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6765 and lola

DIOPT Version :9

Sequence 1:NP_001261582.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:732 Identity:149/732 - (20%)
Similarity:250/732 - (34%) Gaps:232/732 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ENYHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQFFA 68
            :.:.|:|::|.:.|.|...||.:||...|..|.:....           :.|||.:|||.|.:||
  Fly     5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKF-----------LKAHKVVLSACSPYFA 58

  Fly    69 TMFETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGLCRT 133
            |:.:.....:|     :.:..|:.::.::.::.|||.||..:|.|.|..:|:..|.|:|:||  :
  Fly    59 TLLQEQYDKHP-----IFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGL--S 116

  Fly   134 SSSNGGGSGSVVTTTHHPHSLAGHLHPREASTMYMSNGTRTALPPPPPPPQSTMSA-QLQGDLYA 197
            .:..|||      ....|.| :||....:.|..|....|:.|       ..:|..| ...||:..
  Fly   117 DNRTGGG------VAPKPES-SGHHRGGKLSGAYTLEQTKRA-------RLATGGAMDTSGDVSG 167

  Fly   198 SKPGGST---------RFALDHH-HLSSHHSHL-----NHHNPQQQFRGLGASVMP----KDSPV 243
            |:.|.|:         |.::::. |.:|:.|.|     |....||...||..|.:.    ...|.
  Fly   168 SREGSSSPSRRRRKVRRRSMENDAHDNSNSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGPA 232

  Fly   244 IIKSPKLAA--------HTGLLTVASSSKLGISVNKEVAIDPEDKCCFAAPGQLESQS------- 293
            ...|.:.::        .|.:.....|:||..|.              |||....|.|       
  Fly   233 AGTSSQASSTQQQQPLTSTNVTKKTESAKLTSST--------------AAPASGASASAAVQQAH 283

  Fly   294 -HPPPPTTTTTTV----------GGG------------GGSVGG-SGAPPSQPISICTEVGCSSC 334
             |.....||:..:          ||.            |.:||| :.|....|.|      .|:.
  Fly   284 LHQQQAQTTSDAINTENVQAQSQGGAQGVQGDDEDIDEGSAVGGPNSATGPNPAS------ASAS 342

  Fly   335 PLTAGPGADQAETTLRRTEYEEQALRERNEVGLVFERRLRRESACERSRDYYEAPHFEHVVSSRL 399
            .:.||....|..:.:.::....:...:.|.|..|     ..|...|...:|.:..|.|:|..   
  Fly   343 AVHAGVVVKQLASVVDKSSSNHKHKIKDNSVSSV-----GSEMVIEPKAEYDDDAHDENVED--- 399

  Fly   400 AATPPPPPQQAPPSHPPTLRHPHNFLTIKQEPTDWSNNPPNASSA-------------SNNNNLE 451
                                     ||:.:|..........|.::             .::.:.:
  Fly   400 -------------------------LTLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQHDRSQD 439

  Fly   452 ELPL-ASPKQPLDFKMSAVKLEVNRDRGTPSEESEEH-----TLRDYNNF-------------KQ 497
            ||.| |...|..|.:.|      .:|:|..:|.:::.     .|.:.|:.             |:
  Fly   440 ELGLMAQDAQQRDPQAS------KQDKGEQTEGAQDEFELDDCLLESNDIVITQNKDGFVLHVKK 498

  Fly   498 LLVCEICQKSFEDTKMLVRHLGT-------HAGDPTGGTERNLLPSSASGS------TTSASSNL 549
            |  ..|.....|:.:.:.:..|.       .||.||......|..::||.|      ||..|:.:
  Fly   499 L--GNITAAKLEENQAVAQQQGQAAVTVTGPAGQPTPTITELLNAAAASHSEPKPTLTTLTSTPI 561

  Fly   550 ALRS-------VKTYVPKKR--------------------RRVSQQENNMDH--DHVTLLCDLCS 585
            .|.|       :|..:|...                    :.|||:.::.:|  .|.|:..:   
  Fly   562 KLPSSECELINIKKIIPATTTIATHHPHTSSTIIHPHHIIQHVSQEPHHQEHHQQHQTIHIE--- 623

  Fly   586 TSFDTPAEWVRHMNSQH 602
               :.|....:|...||
  Fly   624 ---EVPQTSQQHHQQQH 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6765NP_001261582.1 BTB 24..132 CDD:279045 31/107 (29%)
BTB 53..130 CDD:197585 24/76 (32%)
lolaNP_788308.3 BTB 22..117 CDD:279045 32/112 (29%)
BTB 33..117 CDD:197585 28/101 (28%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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