DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6765 and Trl

DIOPT Version :10

Sequence 1:NP_648233.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster


Alignment Length:745 Identity:134/745 - (17%)
Similarity:218/745 - (29%) Gaps:283/745 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQFFATM 70
            |.|.|..:.|.|.|:|..|..:....|..|.:...|           ..|||.:|.|:|.|...:
  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRS-----------FPAHKIVLCAASPFLLDL 62

  Fly    71 FETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGLCRTSS 135
            .:..|..:|     ||:...::...::.|::::|.||.:|.:..|..:|:..:.|.|:||     
  Fly    63 LKNTPCKHP-----VVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL----- 117

  Fly   136 SNGGGSGSVVTTTHHPHSL-AGHLHPREASTMYMSNGTRTALPPPPPPPQSTMSAQLQGDLYASK 199
                ...:|....:..||: ..|:.|:......:.....||       ||.|:.||:..|::   
  Fly   118 ----APQTVTKDDYTTHSIQLQHMIPQHHDQDQLIATIATA-------PQQTVHAQVVEDIH--- 168

  Fly   200 PGGSTRFALDHHHLSSHHSHLNHHNPQQQFRGLGASVMPKDS------------------PVIIK 246
                            |...:.....|....|...:::..|:                  |.:.|
  Fly   169 ----------------HQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKK 217

  Fly   247 ----SPKLAAHTGLLTVASSSKLGISVNKEVAIDPEDKCCFAAPGQLESQSHPPPPTTTTTTVGG 307
                :||::...|:.|:..                                        |.|...
  Fly   218 MSPTAPKISKVEGMDTIMG----------------------------------------TPTSSH 242

  Fly   308 GGGSV----GGSGAPPSQPISICTEVGCSSCPLTAGPGADQAETTLRRTEYEEQALRERNEVGLV 368
            |.|||    |.:||....         .||.|:....| .:.||.:...                
  Fly   243 GSGSVQQVLGENGAEGQL---------LSSTPIIKSEG-QKVETIVTMD---------------- 281

  Fly   369 FERRLRRESACERSRDYYEAPHFEHVVSSRLAATPPPPPQQAPPSHPPTLRHPHNFLTIKQEPTD 433
                                |:....|:|..|||....|.|.                       
  Fly   282 --------------------PNNMIPVTSANAATGEITPAQG----------------------- 303

  Fly   434 WSNNPPNASSASNNNNLEELPLASPKQPLDFKMSAVKLEVNRDRGTPSEESEEHTLRDYNNFKQL 498
                 ...||..|.:.:    |::||             ..|.:..|..|..    |..:..:|.
  Fly   304 -----ATGSSGGNTSGV----LSTPK-------------AKRAKHPPGTEKP----RSRSQSEQP 342

  Fly   499 LVCEICQKSFEDTKMLVRHLG-THAGDPTGGTERNLLPSSASGSTTSASSNLALRSVKTYVPKKR 562
            ..|.||......::.|.|||. .|...|....|:    .|.||:.|:..|::.:.:         
  Fly   343 ATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEK----KSKSGNDTTLDSSMEMNT--------- 394

  Fly   563 RRVSQQENNMDHDHV----------------------------TLLCDLCSTSFDTPAEWVRHMN 599
              .::.:|.:..|..                            .|     |:|...|.  |:.:.
  Fly   395 --TAEGDNTVGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGAL-----SSSGSVPQ--VQTVQ 450

  Fly   600 SQHTEIELAMFNSKKD---------GEQKGQQPPPPPATSSSST-------VSNSQMQPKYPSST 648
            |.||   |.....|||         .:|:.||......|.|.:|       |...|.|.:.....
  Fly   451 SLHT---LQGVQVKKDPDAQQQQQQQQQQQQQQQQQAMTVSGATGGQVQQQVQQVQQQVQQQQQQ 512

  Fly   649 ATRSTHSLMLHKMSNSDAVATTTSPGASTS 678
            ..:....|..|::.:|....||.:..|..:
  Fly   513 QQQQQQQLQHHQIIDSSGNITTATTSAQAA 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6765NP_648233.1 BTB_POZ 53..129 CDD:453885 20/75 (27%)
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 23/98 (23%)
GAGA 319..372 CDD:462719 16/69 (23%)

Return to query results.
Submit another query.