DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6765 and Trl

DIOPT Version :9

Sequence 1:NP_001261582.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster


Alignment Length:745 Identity:134/745 - (17%)
Similarity:218/745 - (29%) Gaps:283/745 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQFFATM 70
            |.|.|..:.|.|.|:|..|..:....|..|.:...|           ..|||.:|.|:|.|...:
  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRS-----------FPAHKIVLCAASPFLLDL 62

  Fly    71 FETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGLCRTSS 135
            .:..|..:|     ||:...::...::.|::::|.||.:|.:..|..:|:..:.|.|:||     
  Fly    63 LKNTPCKHP-----VVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL----- 117

  Fly   136 SNGGGSGSVVTTTHHPHSL-AGHLHPREASTMYMSNGTRTALPPPPPPPQSTMSAQLQGDLYASK 199
                ...:|....:..||: ..|:.|:......:.....||       ||.|:.||:..|::   
  Fly   118 ----APQTVTKDDYTTHSIQLQHMIPQHHDQDQLIATIATA-------PQQTVHAQVVEDIH--- 168

  Fly   200 PGGSTRFALDHHHLSSHHSHLNHHNPQQQFRGLGASVMPKDS------------------PVIIK 246
                            |...:.....|....|...:::..|:                  |.:.|
  Fly   169 ----------------HQGQILQATTQTNAAGQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKK 217

  Fly   247 ----SPKLAAHTGLLTVASSSKLGISVNKEVAIDPEDKCCFAAPGQLESQSHPPPPTTTTTTVGG 307
                :||::...|:.|:..                                        |.|...
  Fly   218 MSPTAPKISKVEGMDTIMG----------------------------------------TPTSSH 242

  Fly   308 GGGSV----GGSGAPPSQPISICTEVGCSSCPLTAGPGADQAETTLRRTEYEEQALRERNEVGLV 368
            |.|||    |.:||....         .||.|:....| .:.||.:...                
  Fly   243 GSGSVQQVLGENGAEGQL---------LSSTPIIKSEG-QKVETIVTMD---------------- 281

  Fly   369 FERRLRRESACERSRDYYEAPHFEHVVSSRLAATPPPPPQQAPPSHPPTLRHPHNFLTIKQEPTD 433
                                |:....|:|..|||....|.|.                       
  Fly   282 --------------------PNNMIPVTSANAATGEITPAQG----------------------- 303

  Fly   434 WSNNPPNASSASNNNNLEELPLASPKQPLDFKMSAVKLEVNRDRGTPSEESEEHTLRDYNNFKQL 498
                 ...||..|.:.:    |::||             ..|.:..|..|..    |..:..:|.
  Fly   304 -----ATGSSGGNTSGV----LSTPK-------------AKRAKHPPGTEKP----RSRSQSEQP 342

  Fly   499 LVCEICQKSFEDTKMLVRHLG-THAGDPTGGTERNLLPSSASGSTTSASSNLALRSVKTYVPKKR 562
            ..|.||......::.|.|||. .|...|....|:    .|.||:.|:..|::.:.:         
  Fly   343 ATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEK----KSKSGNDTTLDSSMEMNT--------- 394

  Fly   563 RRVSQQENNMDHDHV----------------------------TLLCDLCSTSFDTPAEWVRHMN 599
              .::.:|.:..|..                            .|     |:|...|.  |:.:.
  Fly   395 --TAEGDNTVGSDGAGGAGSAGGQSSATSGKKSSSGSSGSGSGAL-----SSSGSVPQ--VQTVQ 450

  Fly   600 SQHTEIELAMFNSKKD---------GEQKGQQPPPPPATSSSST-------VSNSQMQPKYPSST 648
            |.||   |.....|||         .:|:.||......|.|.:|       |...|.|.:.....
  Fly   451 SLHT---LQGVQVKKDPDAQQQQQQQQQQQQQQQQQAMTVSGATGGQVQQQVQQVQQQVQQQQQQ 512

  Fly   649 ATRSTHSLMLHKMSNSDAVATTTSPGASTS 678
            ..:....|..|::.:|....||.:..|..:
  Fly   513 QQQQQQQLQHHQIIDSSGNITTATTSAQAA 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6765NP_001261582.1 BTB 24..132 CDD:279045 26/107 (24%)
BTB 53..130 CDD:197585 20/76 (26%)
TrlNP_001261846.1 BTB 27..117 CDD:279045 24/105 (23%)
BTB 35..118 CDD:197585 25/107 (23%)
GAGA 319..372 CDD:150045 16/69 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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