DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6683 and CG42526

DIOPT Version :10

Sequence 1:NP_648232.1 Gene:CG6683 / 38970 FlyBaseID:FBgn0035902 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001163401.1 Gene:CG42526 / 8674075 FlyBaseID:FBgn0260431 Length:245 Species:Drosophila melanogaster


Alignment Length:252 Identity:43/252 - (17%)
Similarity:84/252 - (33%) Gaps:90/252 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQFDTRLIELVRANPKLYERELRNAPYEAHKKRHPEIWSSIATSLNSEASACVSRWNHLVAKQR 65
            |..||..||..|:.|..::|:      |.....| .:.|.::|.:.......|..||..|..:..
  Fly     1 MDGFDALLIASVKRNVSIFEK------YHTRYDR-KQAWIAVAQACQKSVEYCQIRWKSLRDRYV 58

  Fly    66 RELAKEKAGGTGSDWSLLPHLKFLQHH----HHPINHRNSGDLSRSTL-------KSSDEVNDDE 119
            ||  .:|...|.|:......|.||:.|    ..|....|:.:.:::.:       :|:||:..:.
  Fly    59 RE--TQKPAATRSNIRKFKELDFLREHIRIRRKPNELCNTLNTNKTLVPGVTVDSQSADELALER 121

  Fly   120 DPLQEAMDEQLAV---------------------------AGA---------------------- 135
            :.:.|...::..:                           .|:                      
  Fly   122 NGITEFQPDEFIIEYKGEEEYLSETDNSSAEFISEDSACNIGSELPYVTKPSFNGEGQSQTQAKF 186

  Fly   136 -------------APAPPTNPAHATPVAQAEKRIEALLEGLGEANRIKAEKRILAYL 179
                         .||.|.:|.:        |.:|::|.|:.::.||..:.::|.::
  Fly   187 MSVMNLIESALKDKPAEPQDPFY--------KYLESILTGVDDSTRIDIQLKVLNFV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6683NP_648232.1 MADF 7..94 CDD:214738 22/90 (24%)
CG42526NP_001163401.1 MADF 8..85 CDD:214738 22/85 (26%)

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