DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6683 and brwl

DIOPT Version :9

Sequence 1:NP_648232.1 Gene:CG6683 / 38970 FlyBaseID:FBgn0035902 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_609298.1 Gene:brwl / 34275 FlyBaseID:FBgn0032130 Length:435 Species:Drosophila melanogaster


Alignment Length:221 Identity:45/221 - (20%)
Similarity:73/221 - (33%) Gaps:76/221 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDTRLIELVRANPKLYERELRNAPYEAHKKRHPEIWSSIATSLNSEASACVSRWNHLVAKQRREL 68
            |:.|.:.|||.:..||::::   |...::....:.|..|:.........|..||.:|.|...|.:
  Fly    57 FNIRFVNLVRTHKCLYDKKV---PEYRNRDNQEKAWVLISKETRESVIHCKERWRNLRACLSRYI 118

  Fly    69 AKEKAGGTGSD-----WSLLPHLKFL-------------------------QH-HHHPI------ 96
            .::    :||:     :.|..|:.||                         || .|.|.      
  Fly   119 KQQ----SGSEPQHKPYYLTEHMAFLLPFLKSSRNSLEGNNSLATLYQMSQQHLQHQPFLLHPAL 179

  Fly    97 ---------------NHRNSGDLSRS------TLKSSDEVNDDEDPLQEAMDEQLAVAGAAPAPP 140
                           |:.|:.|:...      .:|.|....|||:.: :|.|         || .
  Fly   180 HATEEHKYCANTSINNNNNNNDVHNGESMEVLEMKYSISEKDDEETI-DAFD---------PA-V 233

  Fly   141 TNPAHATPVAQAEKRIEALLEGLGEA 166
            ||.......:....|..||..|.|.:
  Fly   234 TNTLGMNRTSSTPTRSSALQGGGGNS 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6683NP_648232.1 MADF 7..94 CDD:214738 23/117 (20%)
brwlNP_609298.1 MADF 60..145 CDD:214738 21/91 (23%)
BESS 356..389 CDD:281011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12243
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.