DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZC3H3 and YTH1

DIOPT Version :9

Sequence 1:NP_648230.1 Gene:ZC3H3 / 38968 FlyBaseID:FBgn0035900 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_015432.1 Gene:YTH1 / 856222 SGDID:S000006311 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:174 Identity:47/174 - (27%)
Similarity:70/174 - (40%) Gaps:41/174 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 ICVSFLRGECTK-PKCLLSHNVTLEKMPVCRYYLR-GVCVRE-DCPYLHKKLSSKTEICIDFVRG 463
            :|..:|||.|.| .:|...|...|.|||.|.::.: |.|.:. ||.|||...:||...|.::..|
Yeast    66 VCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMG 130

  Fly   464 YCPLAAECNKRHEFSCPELERKGKCELPRCVFCKKSPSKRLAKVKSRPKLGSKPVAFTDTAKESS 528
            :|||.:.|.:||               .:.|||:            |...|..|:.         
Yeast   131 FCPLGSSCPRRH---------------IKKVFCQ------------RYMTGFCPLG--------- 159

  Fly   529 TADELPTSSRYFGSHKEPAEAILTRDD-VEQKKPEAEDEDQKEA 571
             .||.......|....|.::..:.||| :..:|.:.|.|.:..|
Yeast   160 -KDECDMEHPQFIIPDEGSKLRIKRDDEINTRKMDEEKERRLNA 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZC3H3NP_648230.1 YTH1 329..519 CDD:227416 36/119 (30%)
ZnF_C3H1 425..447 CDD:214632 9/23 (39%)
YTH1NP_015432.1 YTH1 2..208 CDD:227416 47/174 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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