Protein Alignment ZC3H3 and Clp

DIOPT Version :10

• Sequence 1: NP_648230.1
• Gene: ZC3H3 / 38968
• FlyBaseID: FBgn0035900
• Length: 597
• Species: Drosophila melanogaster
• Sequence 2: NP_477156.1
• Gene: Clp / 33259
• FlyBaseID: FBgn0015621
• Length: 296
• Species: Drosophila melanogaster
• Alignment Length: 166
• Identity: 45/166 - (27%)
• Similarity: 68/166 - (40%)
• Gaps: 36/166 - (21%)

  Fly   363 LNKSLVKTNVPCAIFQKLG-KCVAHSRGKCRKLHDKRQVAICVSFLRGECTK-PKCLLSHNVTLE 425
            ::||:...   |....:.| :|...|....|.:...|.: :|..:|||.|.| .:|...|...:.
  Fly    33 MDKSIAAV---CNFITRNGQECDKGSACPFRHIRGDRTI-VCKHWLRGLCKKGDQCEFLHEYDMT 93

  Fly   426 KMPVCRYYLR-GVCVREDCPYLHKKLSSKTE------------------------ICIDFVRGYC 465
            |||.|.:|.| ..|..::||:||....||.:                        :|:|::.|:|
  Fly    94 KMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLAGFC 158

  Fly   466 PLAAECNKRH-EFSCPELERKGKCE----LPRCVFC 496
            |....|...| .|..|.|...||.:    ||.|.:|
  Fly   159 PEGPSCKHMHPHFELPPLAELGKDQLHKKLPTCHYC 194

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ZC3H3	NP_648230.1	YTH1	329..519	CDD:227416	45/166 (27%)
Clp	NP_477156.1	YTH1	12..175	CDD:227416	37/145 (26%)