DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZC3H3 and T26A8.4

DIOPT Version :9

Sequence 1:NP_648230.1 Gene:ZC3H3 / 38968 FlyBaseID:FBgn0035900 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_501435.1 Gene:T26A8.4 / 177643 WormBaseID:WBGene00020827 Length:574 Species:Caenorhabditis elegans


Alignment Length:175 Identity:39/175 - (22%)
Similarity:56/175 - (32%) Gaps:48/175 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 KPKCLLSHNVTLEKMPVCRYYLRGVCVRED-CPYLHKKLSS--KTEICIDFVRGYCPLAAECNKR 474
            ||:....|.       :|:::..|.|...| |.|.|:...|  :..:|..:...:|....:|...
 Worm   161 KPRFQTEHQ-------ICKFFREGYCRDGDNCLYSHQAEDSLRRPVLCNFYANSFCKKGLQCLML 218

  Fly   475 H-EFSCPELERKGKCELPRCVFCKKSPSKRLAKVKSRPKLGSKPVAFTDTAK---ESSTADELPT 535
            | ||.|... .||:|....|.|                    ..|..||..:   |...|||   
 Worm   219 HGEFPCKSF-HKGQCNHDPCRF--------------------SHVPLTDYTRPIIEKILADE--- 259

  Fly   536 SSRYFGSHKEPAEAILTRD-DVEQKKPEAEDEDQKEAGAPCPRRR 579
                     |..:|...:. ...::.|.|.......|....||||
 Worm   260 ---------EARQAHQAQQAQTYRQNPVANAAAAAAAAQVMPRRR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZC3H3NP_648230.1 YTH1 329..519 CDD:227416 23/109 (21%)
ZnF_C3H1 425..447 CDD:214632 6/22 (27%)
T26A8.4NP_501435.1 ZnF_C3H1 168..189 CDD:214632 7/27 (26%)
ZnF_C3H1 196..221 CDD:214632 4/24 (17%)
PHA03160 <347..437 CDD:165431
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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