DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43163 and Hop2

DIOPT Version :10

Sequence 1:NP_648228.2 Gene:CG43163 / 38966 FlyBaseID:FBgn0262719 Length:2523 Species:Drosophila melanogaster
Sequence 2:NP_176461.1 Gene:Hop2 / 842572 AraportID:AT1G62740 Length:571 Species:Arabidopsis thaliana


Alignment Length:718 Identity:146/718 - (20%)
Similarity:229/718 - (31%) Gaps:280/718 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EKVRQSNAACQSGDFATAVLLYTDALQLDPGNHILYSNRSAALLKQGQFTAALQDATQARDLCPQ 131
            |...:.|||..||||.:||..:|||:.|.|.||:|:||||||......:..||.||.:..:|.|.
plant     4 EAKAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVELKPD 68

  Fly   132 WPKAYFRQGVALQCLGRYGEALAAFASGLAQEPSNKQLMAGLVEASLKSPLRAALEPTLQQLRTM 196
            |.|.|.|.|.|...|.::.||:.|::.||..:|||:.|.:||.:|...:....|..|        
plant    69 WGKGYSRLGAAHLGLNQFDEAVEAYSKGLEIDPSNEGLKSGLADAKASASRSRASAP-------- 125

  Fly   197 QLQESPFVVSSVVGQELLQATQYSAAVTVLEAALRIGSCSLKLRGSVFSALSSAHWALNQLD--- 258
                :|| ..:..|.|:                           .|..:|..|....|.|.|   
plant   126 ----NPF-GDAFQGPEM---------------------------WSKLTADPSTRGLLKQPDFVN 158

  Fly   259 ---------QAIGYMQQDLAVAKSLGDTAGECRAHGNLGSAYFSQGAHKEALTAHRYQLVLAMKC 314
                     ..:....||..|.::||                                ::|.::.
plant   159 MMKEIQRNPSNLNLYLQDQRVMQALG--------------------------------VLLNIQI 191

  Fly   315 KDTQAAAAALTSLGHVYTASGDYPNALASHKQCVQLFKQLGDRLQEAREIGNVGAVYLALGECEA 379
            :..||                                   ||.::              :||.|.
plant   192 RTQQA-----------------------------------GDDME--------------IGEEEM 207

  Fly   380 ALDCHSQ-HLRLARKLHDQVE-------------EARAYSNLGSAHHQRRQFTQAAACHEQVLRI 430
            |:....: .:...||...:.|             :|:....||:|.::::.|..|.    |....
plant   208 AVPSRKEPEVEKKRKPEPEPEPEPEFGEEKQKKLKAQKEKELGNAAYKKKDFETAI----QHYST 268

  Fly   431 AQALGDRSM-----EAAAYAGLGHAARCAGDASASKRFHERQLAMALAARDKLGE-GRACSNLGI 489
            |..:.|..:     .||.:..:|....|..|.                  ||..| ||   .|..
plant   269 AMEIDDEDISYITNRAAVHLEMGKYDECIKDC------------------DKAVERGR---ELRS 312

  Fly   490 VYQMLGSHDAALKLHQAHLGIARSLGDRTGMGKAYGNMARMAHMAGSYEAAVKYHKQELAINQAM 554
            .|:|                :|::|   |..|.|.|.||:::.   .||..::.:::        
plant   313 DYKM----------------VAKAL---TRKGTALGKMAKVSK---DYEPVIQTYQK-------- 347

  Fly   555 NDRSAEAATHGNLAVAYQALGAHDAALTHYRAHLATARSLKDTAGEACALLNLGNCLSGRQEYEE 619
                                     |||.:|    ...:||          .|......::|.|:
plant   348 -------------------------ALTEHR----NPETLK----------RLNEAERAKKELEQ 373

  Fly   620 AVPHYESYLMLAQELGDVAAEGKACHLLGYAHFSLGNYRAAVRYYDQDLALAKDAQHRPNMGRAY 684
            . .:|:      ..:||...|      .|...|....|..|||:|.:.:      :..|...|||
plant   374 Q-EYYD------PNIGDEERE------KGNDFFKEQKYPDAVRHYTEAI------KRNPKDPRAY 419

  Fly   685 CNLGLAHLALGHTAAAL----ECQQLFLAVAHATNQLPAKFRALGNIGDILIRTGSHEEAIKLYQ 745
            .|....:..||.....|    :|.:|.          |...:.....|.:......::.|::.||
plant   420 SNRAACYTKLGAMPEGLKDAEKCIELD----------PTFLKGYSRKGAVQFFMKEYDNAMETYQ 474

  Fly   746 RQL 748
            :.|
plant   475 KGL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43163NP_648228.2 PEP_TPR_lipo <78..751 CDD:274350 142/707 (20%)
TPR repeat 98..128 CDD:276809 13/29 (45%)
TPR repeat 133..161 CDD:276809 10/27 (37%)
TPR repeat 243..269 CDD:276809 7/37 (19%)
TPR repeat 281..311 CDD:276809 0/29 (0%)
TPR repeat 321..349 CDD:276809 0/27 (0%)
TPR repeat 354..390 CDD:276809 6/36 (17%)
TPR repeat 401..429 CDD:276809 7/27 (26%)
TPR repeat 441..469 CDD:276809 5/27 (19%)
TPR repeat 482..509 CDD:276809 4/26 (15%)
TPR repeat 522..549 CDD:276809 6/26 (23%)
TPR 523..781 CDD:440225 42/230 (18%)
TPR repeat 561..595 CDD:276809 4/33 (12%)
TPR repeat 600..630 CDD:276809 4/29 (14%)
TPR repeat 642..669 CDD:276809 7/26 (27%)
TPR repeat 680..716 CDD:276809 9/39 (23%)
TPR repeat 721..749 CDD:276809 5/28 (18%)
TPR_12 801..865 CDD:315987
TPR repeat 801..829 CDD:276809
Spy 841..>1073 CDD:443119
TPR repeat 841..878 CDD:276809
TPR repeat 883..913 CDD:276809
TPR repeat 924..949 CDD:276809
TPR repeat 964..998 CDD:276809
COG4995 975..1718 CDD:444019
TPR repeat 1004..1032 CDD:276809
TPR repeat 1043..1073 CDD:276809
TPR repeat 1081..1109 CDD:276809
CHAT 1421..1718 CDD:432771
Hop2NP_176461.1 PLN03088 1..>102 CDD:215568 42/97 (43%)
TPR repeat 2..30 CDD:276809 13/25 (52%)
TPR repeat 35..65 CDD:276809 13/29 (45%)
TPR repeat 70..98 CDD:276809 10/27 (37%)
STI1 134..188 CDD:436075 13/112 (12%)
TPR repeat 243..271 CDD:276809 8/31 (26%)
TPR 247..276 CDD:197478 8/32 (25%)
TPR 271..548 CDD:440225 60/326 (18%)
TPR repeat 276..306 CDD:276809 7/47 (15%)
TPR repeat 318..349 CDD:276809 10/69 (14%)
TPR repeat 386..410 CDD:276809 8/35 (23%)
TPR repeat 415..445 CDD:276809 8/29 (28%)
TPR repeat 450..478 CDD:276809 5/28 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.