DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43163 and Hop1

DIOPT Version :10

Sequence 1:NP_648228.2 Gene:CG43163 / 38966 FlyBaseID:FBgn0262719 Length:2523 Species:Drosophila melanogaster
Sequence 2:NP_172691.1 Gene:Hop1 / 837781 AraportID:AT1G12270 Length:572 Species:Arabidopsis thaliana


Alignment Length:629 Identity:141/629 - (22%)
Similarity:234/629 - (37%) Gaps:119/629 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EKVRQSNAACQSGDFATAVLLYTDALQLDPGNHILYSNRSAALLKQGQFTAALQDATQARDLCPQ 131
            |...:.|||..||||.||:..:|:|:.|.|.||:|:||||||.....|:..||.||.:...|.|.
plant     4 EAKAKGNAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEALSDAKETIKLKPY 68

  Fly   132 WPKAYFRQGVALQCLGRYGEALAAFASGLAQEPSNKQLMAGLVEASLK-SPLRAALEP------- 188
            |||.|.|.|.|...|.::..|:.|:..||..:|:|:.|.:||.:|... :..|||..|       
plant    69 WPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDPTNEALKSGLADAEASVARSRAAPNPFGDAFQG 133

  Fly   189 -------TLQQLRTMQLQESPFVVSSVVGQELLQATQYSAAVTVLEAALRIGSCSLKLRGSVFSA 246
                   |........||:..||       .::|..|.:.:           |.:|.|:      
plant   134 PEMWTKLTSDPSTRGFLQQPDFV-------NMMQEIQKNPS-----------SLNLYLK------ 174

  Fly   247 LSSAHWALNQLDQAIGYMQQDLAVAKSL--------GDTAGECRAHGNLGSAYFSQ---GAHKEA 300
                       ||.:   .|.|.|..::        ||.|..  ...::|.:..::   ...:|.
plant   175 -----------DQRV---MQSLGVLLNVKFRPPPPQGDEAEV--PESDMGQSSSNEPEVEKKREP 223

  Fly   301 LTAHRYQLVLAMKCKDTQAAAAALTSLGHVYTASGDYPNALASHKQCVQLFKQLGDRLQEAREIG 365
            ......::....:.|:.:..|.....||:......|:..|:..:...:::..      ::...:.
plant   224 EPEPEPEVTEEKEKKERKEKAKKEKELGNAAYKKKDFETAIQHYSTAIEIDD------EDISYLT 282

  Fly   366 NVGAVYLALGECEAALDCHSQHLRLARKLH-DQVEEARAYSNLGSAHHQRRQFTQAAAC---HEQ 426
            |..||||.:|:....::..::.:...|:|. |....|||.:..|:|      .|:.|.|   :|.
plant   283 NRAAVYLEMGKYNECIEDCNKAVERGRELRSDYKMVARALTRKGTA------LTKMAKCSKDYEP 341

  Fly   427 VLRIAQALGDRSMEAAAYAGLGHAARC-------------AGDASASKR---FHERQLAMAL--- 472
            .:...|..............|..|.|.             .||....|.   |.|::...|:   
plant   342 AIEAFQKALTEHRNPDTLKRLNDAERAKKEWEQKQYFDPKLGDEEREKGNDFFKEQKYPEAIKHY 406

  Fly   473 --AARDKLGEGRACSNLGIVYQMLGSHDAALKLHQAHLGIARSLGDRTGMGKAYGNMARMAHMAG 535
              |.:....:.:|.||....|..||:....||..:..:.:     |.| ..|.|...|.:.....
plant   407 TEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDAEKCIEL-----DPT-FSKGYSRKAAVQFFLK 465

  Fly   536 SYEAAVKYHKQELAINQAMNDRSAEAATHGNLAVAYQALGAHDAALTHYRAHLATARSLKDTAGE 600
            .|:.|::.::..|.     :|.|.:....|......|...|:...||........|:.::|.  |
plant   466 EYDNAMETYQAGLE-----HDPSNQELLDGVKRCVQQINKANRGDLTPEELKERQAKGMQDP--E 523

  Fly   601 ACALLN---LGNCLSGRQEYEEAVPHYESYLMLAQELGDVAAEG 641
            ...:|.   :...||..||...|...:....|:..::..:.:.|
plant   524 IQNILTDPVMRQVLSDLQENPSAAQKHMQNPMVMNKIQKLISAG 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43163NP_648228.2 PEP_TPR_lipo <78..751 CDD:274350 137/618 (22%)
TPR repeat 98..128 CDD:276809 14/29 (48%)
TPR repeat 133..161 CDD:276809 10/27 (37%)
TPR repeat 243..269 CDD:276809 3/25 (12%)
TPR repeat 281..311 CDD:276809 2/32 (6%)
TPR repeat 321..349 CDD:276809 5/27 (19%)
TPR repeat 354..390 CDD:276809 6/35 (17%)
TPR repeat 401..429 CDD:276809 9/30 (30%)
TPR repeat 441..469 CDD:276809 8/43 (19%)
TPR repeat 482..509 CDD:276809 8/26 (31%)
TPR repeat 522..549 CDD:276809 5/26 (19%)
TPR 523..781 CDD:440225 23/122 (19%)
TPR repeat 561..595 CDD:276809 6/33 (18%)
TPR repeat 600..630 CDD:276809 7/32 (22%)
TPR repeat 642..669 CDD:276809 141/629 (22%)
TPR repeat 680..716 CDD:276809
TPR repeat 721..749 CDD:276809
TPR_12 801..865 CDD:315987
TPR repeat 801..829 CDD:276809
Spy 841..>1073 CDD:443119
TPR repeat 841..878 CDD:276809
TPR repeat 883..913 CDD:276809
TPR repeat 924..949 CDD:276809
TPR repeat 964..998 CDD:276809
COG4995 975..1718 CDD:444019
TPR repeat 1004..1032 CDD:276809
TPR repeat 1043..1073 CDD:276809
TPR repeat 1081..1109 CDD:276809
CHAT 1421..1718 CDD:432771
Hop1NP_172691.1 PLN03088 1..>101 CDD:215568 42/96 (44%)
TPR repeat 2..30 CDD:276809 12/25 (48%)
TPR repeat 35..65 CDD:276809 14/29 (48%)
TPR repeat 70..98 CDD:276809 10/27 (37%)
STI1 133..187 CDD:436075 15/91 (16%)
TPR 250..277 CDD:197478 4/32 (13%)
TPR 271..549 CDD:440225 61/302 (20%)
TPR repeat 277..307 CDD:276809 6/29 (21%)
TPR repeat 319..350 CDD:276809 10/36 (28%)
TPR repeat 387..411 CDD:276809 5/23 (22%)
TPR repeat 416..446 CDD:276809 8/29 (28%)
TPR repeat 451..479 CDD:276809 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.