DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43163 and Hop3

DIOPT Version :10

Sequence 1:NP_648228.2 Gene:CG43163 / 38966 FlyBaseID:FBgn0262719 Length:2523 Species:Drosophila melanogaster
Sequence 2:NP_001031620.1 Gene:Hop3 / 826849 AraportID:AT4G12400 Length:558 Species:Arabidopsis thaliana


Alignment Length:137 Identity:30/137 - (21%)
Similarity:45/137 - (32%) Gaps:64/137 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TKKFSTVYEKFNDTIKELDRVSGTCPIRPAIPFTPPKEKVEPIYHNECNFDDKAHLGVSDSALFV 121
            |:|||.:|         :|.     |:.....||.               |||            
plant   150 TEKFSVLY---------IDN-----PVGTGFSFTD---------------DDK------------ 173

  Fly   122 QGF--DTSHPRHEIKTALW-----------NHFSSCGKVYL-IYVPIACSTGASVGYAFIDMKNE 172
             ||  |.:....::.:||.           |.|.:.|:.|. .|||       ::|| :|...|.
plant   174 -GFAKDQNDVGRDLYSALTQFFQMFPEYQKNEFYATGESYAGKYVP-------AIGY-YIHTHNP 229

  Fly   173 TKGLTLN 179
            |..:.:|
plant   230 TAKVKIN 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43163NP_648228.2 PEP_TPR_lipo <78..751 CDD:274350 24/116 (21%)
TPR repeat 98..128 CDD:276809 6/31 (19%)
TPR repeat 133..161 CDD:276809 9/39 (23%)
TPR repeat 243..269 CDD:276809
TPR repeat 281..311 CDD:276809
TPR repeat 321..349 CDD:276809
TPR repeat 354..390 CDD:276809
TPR repeat 401..429 CDD:276809
TPR repeat 441..469 CDD:276809
TPR repeat 482..509 CDD:276809
TPR repeat 522..549 CDD:276809
TPR 523..781 CDD:440225
TPR repeat 561..595 CDD:276809
TPR repeat 600..630 CDD:276809
TPR repeat 642..669 CDD:276809
TPR repeat 680..716 CDD:276809
TPR repeat 721..749 CDD:276809
TPR_12 801..865 CDD:315987
TPR repeat 801..829 CDD:276809
Spy 841..>1073 CDD:443119
TPR repeat 841..878 CDD:276809
TPR repeat 883..913 CDD:276809
TPR repeat 924..949 CDD:276809
TPR repeat 964..998 CDD:276809
COG4995 975..1718 CDD:444019
TPR repeat 1004..1032 CDD:276809
TPR repeat 1043..1073 CDD:276809
TPR repeat 1081..1109 CDD:276809
CHAT 1421..1718 CDD:432771
Hop3NP_001031620.1 TPR repeat 2..30 CDD:276809
TPR 8..>113 CDD:440225
TPR repeat 35..65 CDD:276809
TPR repeat 70..98 CDD:276809
STI1 131..185 CDD:436075 15/76 (20%)
TPR repeat 234..258 CDD:276809 1/3 (33%)
TPR 258..533 CDD:440225
TPR repeat 263..293 CDD:276809
TPR repeat 305..336 CDD:276809
TPR repeat 369..397 CDD:276809
TPR repeat 402..432 CDD:276809
TPR repeat 437..465 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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