DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43163 and zgc:123010

DIOPT Version :9

Sequence 1:NP_001246673.1 Gene:CG43163 / 38966 FlyBaseID:FBgn0262719 Length:2523 Species:Drosophila melanogaster
Sequence 2:XP_005169572.1 Gene:zgc:123010 / 641500 ZFINID:ZDB-GENE-051120-15 Length:501 Species:Danio rerio


Alignment Length:268 Identity:68/268 - (25%)
Similarity:113/268 - (42%) Gaps:62/268 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AAGNNENNAKIAIVGEQ----------LLNKMS-----------QRDFSENEPECTPELPAANRA 63
            |:||..|..:.|..||:          :.|.:|           .::..|||..     ||....
Zfish   143 ASGNKSNRQQGARSGEEDPGWDVNSAFVANAVSHIRPKAKSKGKSKENKENESR-----PAEVIG 202

  Fly    64 LFLEKVRQSNAA-------CQSGDFATAVLLYTDALQLDPGNHILYSNRSAALLKQGQFTAALQD 121
            ....|.::|.:.       .|.|.:..||.|:|:|::.||.::..:.|||.......|:..||.|
Zfish   203 FSEAKTKRSASLVEKGIRFVQEGQYTQAVSLFTEAIKCDPKDYRFFGNRSYCYCCLEQYALALAD 267

  Fly   122 ATQARDLCPQWPKAYFRQGVALQCLGRYGEALAAFASGLAQEPSNKQLMAGLVEASLKSPLRAAL 186
            |.::..:.|.|||.|:|:|.||..|.||.||          |.:.:|::.  ::...:..:...|
Zfish   268 AEKSIQMAPDWPKGYYRRGSALMGLKRYSEA----------EKAMEQVLK--LDGDCEEAVNDLL 320

  Fly   187 EPTLQQL--------RTMQLQESPFVVSSVVGQELLQATQYSAAVTVLEAALRIGSCSLKLRGSV 243
            ...:|||        :::||.|....|.:||.   .:|:....|:      |:.|.|:....|:|
Zfish   321 YCKVQQLTELGYDEEQSIQLLEKYNTVQAVVA---AKASNQDCAL------LQPGPCNSLWVGNV 376

  Fly   244 FSALSSAH 251
            .:.|:..|
Zfish   377 TTELTEKH 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43163NP_001246673.1 TPR_11 70..130 CDD:290150 18/66 (27%)
TPR repeat 98..128 CDD:276809 8/29 (28%)
TPR_11 101..164 CDD:290150 22/62 (35%)
TPR repeat 133..161 CDD:276809 12/27 (44%)
TPR repeat 243..269 CDD:276809 3/9 (33%)
TPR repeat 281..311 CDD:276809
TPR_12 282..353 CDD:290160
TPR_12 320..393 CDD:290160
TPR repeat 321..349 CDD:276809
TPR repeat 354..390 CDD:276809
TPR_12 401..473 CDD:290160
TPR repeat 401..429 CDD:276809
TPR_7 403..438 CDD:289919
TPR repeat 441..469 CDD:276809
TPR 467..752 CDD:223533
TPR repeat 482..509 CDD:276809
TPR repeat 522..549 CDD:276809
TPR repeat 561..595 CDD:276809
TPR repeat 600..630 CDD:276809
TPR repeat 642..669 CDD:276809
TPR_7 643..677 CDD:289919
TPR repeat 680..716 CDD:276809
TPR repeat 721..749 CDD:276809
TPR_7 723..758 CDD:289919
TPR repeat 801..829 CDD:276809
TPR_12 841..914 CDD:290160
TPR repeat 841..878 CDD:276809
TPR_12 882..949 CDD:290160
TPR repeat 883..913 CDD:276809
TPR 884..914 CDD:197478
TPR repeat 924..949 CDD:276809
TPR_12 964..1036 CDD:290160
TPR repeat 964..998 CDD:276809
TPR repeat 1004..1032 CDD:276809
TPR repeat 1043..1073 CDD:276809
TPR_12 1044..1112 CDD:290160
TPR_7 1046..1078 CDD:289919
TPR_12 1081..1153 CDD:290160
TPR repeat 1081..1109 CDD:276809
CHAT 1421..1718 CDD:289536
Treacle <1957..2287 CDD:281536
zgc:123010XP_005169572.1 TPR_11 214..276 CDD:290150 17/61 (28%)
TPR repeat 214..239 CDD:276809 7/24 (29%)
TPR repeat 244..274 CDD:276809 8/29 (28%)
TPR_11 250..309 CDD:290150 24/70 (34%)
TPR_2 279..309 CDD:285020 14/41 (34%)
TPR repeat 279..307 CDD:276809 14/37 (38%)
TPR_11 282..343 CDD:290150 18/72 (25%)
TPR repeat 313..343 CDD:276809 6/29 (21%)
RRM <364..>438 CDD:223796 6/21 (29%)
RRM 370..436 CDD:214636 4/15 (27%)
zf-CCCH 471..492 CDD:279036
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0548
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.