DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43163 and Sugt1

DIOPT Version :9

Sequence 1:NP_001246673.1 Gene:CG43163 / 38966 FlyBaseID:FBgn0262719 Length:2523 Species:Drosophila melanogaster
Sequence 2:NP_001013069.1 Gene:Sugt1 / 290408 RGDID:1307550 Length:336 Species:Rattus norvegicus


Alignment Length:283 Identity:56/283 - (19%)
Similarity:102/283 - (36%) Gaps:73/283 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PAANRALFLEKVRQSNAACQSGDFATAVLLYTDALQLDPGNHILYSNRSAALLKQGQFTAALQDA 122
            ||:::..|    :....|...||...|:...|.||:.:|.:...|..|:...:..|::...:.|.
  Rat     8 PASSQRFF----QSFPDALIDGDPQAALEELTKALEQNPDDAQYYCQRAYCHILLGKYCDGIADV 68

  Fly   123 TQARDLCPQWPKAYFRQGVALQCLGRYGEALAAFASGLAQEPSN----------KQLMAGLVEAS 177
            .::.:|.|....|..|:|:.......|..||..||.|...:.::          :::..|     
  Rat    69 KKSLELNPNNSTALLRKGICEYYEKDYASALETFAEGQKLDGTDTNFDIWIKRCQEIQNG----- 128

  Fly   178 LKSPLRAALEPTLQQLRTMQLQ-ESPFVVSSVVGQELLQATQYSAAVTVLEAALRIGS---CSLK 238
             ..|..:|.:.|..:::....| ||..:::.::........:...:...|.|.::|.|   ||||
  Rat   129 -SEPEVSASQRTQSKIKYDWYQTESHVIITLMIKNVQKNDVRVDFSEKELSAVVKIPSGEDCSLK 192

  Fly   239 LR--------GSVFSAL----------------------------------------SSAHWALN 255
            ||        .|.|..|                                        ||:|:..|
  Rat   193 LRLLHPIIPEQSTFKVLSTKIEIKMKKPEAVRWEKLEGQGDVPAPKQFTADVKNMYPSSSHYTRN 257

  Fly   256 QLDQAIGYMQQDLAVAKSLGDTA 278
             .|:.:|.::::....|..||.|
  Rat   258 -WDKLVGEIKEEEKNEKLEGDAA 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43163NP_001246673.1 TPR_11 70..130 CDD:290150 13/59 (22%)
TPR repeat 98..128 CDD:276809 4/29 (14%)
TPR_11 101..164 CDD:290150 15/62 (24%)
TPR repeat 133..161 CDD:276809 9/27 (33%)
TPR repeat 243..269 CDD:276809 8/65 (12%)
TPR repeat 281..311 CDD:276809
TPR_12 282..353 CDD:290160
TPR_12 320..393 CDD:290160
TPR repeat 321..349 CDD:276809
TPR repeat 354..390 CDD:276809
TPR_12 401..473 CDD:290160
TPR repeat 401..429 CDD:276809
TPR_7 403..438 CDD:289919
TPR repeat 441..469 CDD:276809
TPR 467..752 CDD:223533
TPR repeat 482..509 CDD:276809
TPR repeat 522..549 CDD:276809
TPR repeat 561..595 CDD:276809
TPR repeat 600..630 CDD:276809
TPR repeat 642..669 CDD:276809
TPR_7 643..677 CDD:289919
TPR repeat 680..716 CDD:276809
TPR repeat 721..749 CDD:276809
TPR_7 723..758 CDD:289919
TPR repeat 801..829 CDD:276809
TPR_12 841..914 CDD:290160
TPR repeat 841..878 CDD:276809
TPR_12 882..949 CDD:290160
TPR repeat 883..913 CDD:276809
TPR 884..914 CDD:197478
TPR repeat 924..949 CDD:276809
TPR_12 964..1036 CDD:290160
TPR repeat 964..998 CDD:276809
TPR repeat 1004..1032 CDD:276809
TPR repeat 1043..1073 CDD:276809
TPR_12 1044..1112 CDD:290160
TPR_7 1046..1078 CDD:289919
TPR_12 1081..1153 CDD:290160
TPR repeat 1081..1109 CDD:276809
CHAT 1421..1718 CDD:289536
Treacle <1957..2287 CDD:281536
Sugt1NP_001013069.1 TPR 1 11..44 9/36 (25%)
PLN03088 21..336 CDD:215568 53/266 (20%)
TPR repeat 44..74 CDD:276809 4/29 (14%)
TPR 2 45..78 6/32 (19%)
TPR 45..78 CDD:197478 6/32 (19%)
TPR 3 79..112 9/32 (28%)
TPR repeat 79..107 CDD:276809 9/27 (33%)
p23_CS_hSgt1_like 146..229 CDD:107239 16/82 (20%)
SGS 256..336 CDD:282811 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0548
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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