DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Unr and csde1

DIOPT Version :9

Sequence 1:NP_001137912.1 Gene:Unr / 38963 FlyBaseID:FBgn0263352 Length:1057 Species:Drosophila melanogaster
Sequence 2:XP_012819252.1 Gene:csde1 / 595092 XenbaseID:XB-GENE-944014 Length:890 Species:Xenopus tropicalis


Alignment Length:972 Identity:376/972 - (38%)
Similarity:520/972 - (53%) Gaps:216/972 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 FQSNSVLTNGAGSGSSIFGSQSSNSSAAAADPSQTTRETGIIEKLLHSYGFIQCCERQARLFFHF 214
            |..|.:..||...        ..|.:||       .||||:|||||.|||||||.|||||||||.
 Frog    43 FDPNLLHNNGHNG--------YPNGTAA-------LRETGVIEKLLTSYGFIQCSERQARLFFHC 92

  Fly   215 SQFSGNIDHLKIGDPVEFEMTYDRRTGKPIASQVSKIAPEVVLSEERVTGTVTTEL--RTDSANN 277
            ||::||:..||:||.||||::.|||||||||.::.||..| :|.|||:.|.|...:  ..::.:.
 Frog    93 SQYNGNLQELKVGDDVEFEVSADRRTGKPIAVKLVKIKTE-ILPEERINGQVVCAVPHNLETKSP 156

  Fly   278 VLNSSETTGRISYENRGECFFLPYTKDDVEGNVNLRAGDKVSFQIATNQR-GNLGACHIRLENPA 341
            .......:|.:.||..||.|:|.||.:||||:|:|..|||:||.|.||:. |.:.|.:|.:....
 Frog   157 AAPGQSPSGSVCYERNGEVFYLTYTPEDVEGSVHLETGDKISFIIETNKHTGAVSARNIMILMKR 221

  Fly   342 QPVKYRGVVCSMKESFGFIERADVVKEIFFHFSEAEGNVE-LRPGDDVEFTIQTRSVSGSGDPTN 405
            :.::.:||||:|||:||||||.|||||||||:||.:|::| |:|||||||||:.|:         
 Frog   222 KQMRCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRN--------- 277

  Fly   406 PNMLQSKMQSASVPPQGREFACNITRLAPGSVIFEDVDSTVYKGQVLKSLDRNNPVRQNNDPLPG 470
                            |:|.|.::..|..|:|||||:....::|.|.|.:.: .|.:..||||||
 Frog   278 ----------------GKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK-VPNKNQNDPLPG 325

  Fly   471 RIRYRALDY-SEVEVPFGDKDQKGDFTLRHGDWVQFLLATDRRDQLQRATSIALLDETFKVSGEK 534
            ||:   :|: ...|:||||||.|...||..||.|:|.::|||||:|:|||:|..|.:||:.:.|.
 Frog   326 RIK---VDFVIPKELPFGDKDTKSKVTLLEGDRVRFNISTDRRDKLERATNIEFLPDTFQYTNES 387

  Fly   535 REQGTIASLKEGFGFLRCVERQARLFFHFTEVLDTSREIDINDEVEFTVIQEPGLAYNNSRLQAI 599
            ||.|.||::::||||::||:|.||:||||:|||| ..::.|:|||||||:.:...|..|   .||
 Frog   388 REMGVIAAMRDGFGFIKCVDRDARMFFHFSEVLD-GNQLHISDEVEFTVVPDMLSAQRN---HAI 448

  Fly   600 RIKHLPPNSVQFETLVASNIEGCVTREA------PKSPIKSQDR-----VEGGVITYEHADVKKT 653
            |||.||..:|.|.|.......|.|.:||      ..||.|.:::     .|.|:|:||...::.|
 Frog   449 RIKKLPKGTVSFHTQSEHRFIGLVEKEATAVNTKSSSPNKGKEKKKDKECEEGIISYEDCGIRLT 513

  Fly   654 IMYFLKDCEK--PPRIGERVRFDIYMVKRNKECIAVNVQQVSLHQQQQQQQQQLHLNQSNAGANI 716
            :.|.|||.|.  .|::|::|.|.|...||..:..||                             
 Frog   514 VSYHLKDIEGSCAPQVGDKVEFSICEAKRTGQQSAV----------------------------- 549

  Fly   717 NQNDQLGGLSNGISSSSSNASLQNGYVMHGSPGGSTSSVGSNNPVHLDEFKMENNNHAGSDAGQV 781
                                              |...:|.|                 |:|.:.
 Frog   550 ----------------------------------SMKVLGRN-----------------SNAKRF 563

  Fly   782 YRGFIAVMKENFGFIETLSHDEEVFFHFSNYMGNPNWLELGQEVEYTLARNGNTSVSGNCLPAEN 846
            | |::|.:|:|||||||.:||:|:|||:|.|.|:.:.||||..|||:|::.     .||.:.||.
 Frog   564 Y-GYVATLKDNFGFIETSNHDKEIFFHYSEYSGDVDKLELGDMVEYSLSKG-----KGNKVSAER 622

  Fly   847 VRMLPKNSIPQPAVLETTHNGVVARPLRCINPDQQEYAGLIEILDEL------------RTTVIS 899
            |....:.:.....|..|.:.|.|.||||.::|.|.||.|:||:|:|:            :...|.
 Frog   623 VTKAHQVNGSNDEVDPTVYWGKVVRPLRSVDPTQTEYQGMIELLEEVEDKQKITEEIPEQAEEIE 687

  Fly   900 QHE-----------------------------------FGITSLVNKRDLLQKGDLVSFR---ID 926
            ..|                                   |||..:.||.|.|.||:.|.|:   :.
 Frog   688 DEEEEEEEEEEEEEEEDDDDDEGSKEKKHASMKGRLIPFGIVGMENKADCLLKGETVKFQLCVLS 752

  Fly   927 ESGRAACVNAVRQKKRATVDSIKGQFGFLNFEVEDGKKLFFHMSEVQGNTVALHPGDTVEFSVVT 991
            ::|:....| :...:|.||:.:|.||||:|:||.|.||||||:.||| :.|.|..||.|||||:.
 Frog   753 QNGQTMACN-IEPLRRGTVECVKDQFGFINYEVGDSKKLFFHVKEVQ-DGVELQAGDEVEFSVIL 815

  Fly   992 NQRNGKSSACNVLKIN--------DRPDRLISRLK-LNGDD-TVPRLILIRAPKGPQG-KGF 1042
            |||.||.|.|||..|:        .|||||:|||| :..|| :.|||:::|.|:||.. |||
 Frog   816 NQRTGKCSGCNVTLISKGPEMVAAPRPDRLVSRLKSITLDDASAPRLMVLRQPRGPDNTKGF 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UnrNP_001137912.1 CSP 188..251 CDD:214633 44/62 (71%)
S1_like 347..395 CDD:299122 36/48 (75%)
CSP 537..604 CDD:214633 35/66 (53%)
S1_like 790..834 CDD:299122 25/43 (58%)
CSP 942..1006 CDD:214633 39/63 (62%)
csde1XP_012819252.1 CSD 65..129 CDD:278729 45/63 (71%)
CSD 226..288 CDD:278729 40/86 (47%)
CSP 390..453 CDD:214633 35/66 (53%)
S1_like 564..625 CDD:299122 33/66 (50%)
CSD 766..830 CDD:278729 39/64 (61%)
SUZ-C 864..880 CDD:289656 7/14 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7176
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5179
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D136290at2759
OrthoFinder 1 1.000 - - FOG0008060
OrthoInspector 1 1.000 - - oto105125
Panther 1 1.100 - - LDO PTHR12913
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6011
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.110

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