DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Unr and Csde1

DIOPT Version :9

Sequence 1:NP_001137912.1 Gene:Unr / 38963 FlyBaseID:FBgn0263352 Length:1057 Species:Drosophila melanogaster
Sequence 2:XP_006501460.1 Gene:Csde1 / 229663 MGIID:92356 Length:844 Species:Mus musculus


Alignment Length:923 Identity:379/923 - (41%)
Similarity:517/923 - (56%) Gaps:170/923 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 FQSNSVLTNGAGSGSSIFGSQSSNSSAAAADPSQTTRETGIIEKLLHSYGFIQCCERQARLFFHF 214
            |..|.:..||...        ..|.::||      .||||:|||||.|||||||.|||||||||.
Mouse    49 FDPNLLHNNGHNG--------YPNGTSAA------LRETGVIEKLLTSYGFIQCSERQARLFFHC 99

  Fly   215 SQFSGNIDHLKIGDPVEFEMTYDRRTGKPIASQVSKIAPEVVLSEERVTGTVTTEL--RTDSANN 277
            ||::||:..||:||.||||::.|||||||||.::.||.|| :..|||:.|.|...:  ..:|.:.
Mouse   100 SQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAIKLVKIKPE-IHPEERMNGQVVCAVPHNLESKSP 163

  Fly   278 VLNSSETTGRISYENRGECFFLPYTKDDVEGNVNLRAGDKVSFQIATNQR-GNLGACHIRLENPA 341
            .......||.:.||..||.|:|.||.:||||||.|..|||::|.|..|:. |.:.|.:|.|....
Mouse   164 AAPGQSPTGSVCYERNGEVFYLTYTSEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLKKK 228

  Fly   342 QPVKYRGVVCSMKESFGFIERADVVKEIFFHFSEAEGNVE-LRPGDDVEFTIQTRSVSGSGDPTN 405
            | .:.:||||:|||:||||||.|||||||||:||.:|::| |:|||||||||:.|:         
Mouse   229 Q-ARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRN--------- 283

  Fly   406 PNMLQSKMQSASVPPQGREFACNITRLAPGSVIFEDVDSTVYKGQVLKSLDRNNPVRQNNDPLPG 470
                            |:|.|.::..|..|:|||||:....::|.|.|.:.: .|.:..||||||
Mouse   284 ----------------GKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPK-VPSKNQNDPLPG 331

  Fly   471 RIRYRALDY-SEVEVPFGDKDQKGDFTLRHGDWVQFLLATDRRDQLQRATSIALLDETFKVSGEK 534
            ||:   :|: ...|:||||||.|...||..||.|:|.::|||||:|:|||:|.:|..||:.:.|.
Mouse   332 RIK---VDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEA 393

  Fly   535 REQGTIASLKEGFGFLRCVERQARLFFHFTEVLDTSREIDINDEVEFTVIQEPGLAYNNSRLQAI 599
            ||.|.||::::||||::||:|.||:||||:|:|| ..::.|.|||||||:.:...|..|   .||
Mouse   394 REMGVIAAMRDGFGFIKCVDRDARMFFHFSEILD-GNQLHIADEVEFTVVPDMLSAQRN---HAI 454

  Fly   600 RIKHLPPNSVQFETLVASNIEGCVTREA----PK--SPIKSQDR-VEGGVITYEHADVKKTIMYF 657
            |||.||..:|.|.:.......|.|.:||    ||  ||.|.:|: .|.|:|.|:...||.||.:.
Mouse   455 RIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGKDKEAEDGIIAYDDCGVKLTIAFQ 519

  Fly   658 LKDCE--KPPRIGERVRFDIYMVKRNKECIAVNVQQVSLHQQQQQQQQQLHLNQSNAGANINQND 720
            .||.|  ..|:||::|.|.|                    ..:|:..||:.......|.|.|...
Mouse   520 AKDVEGSTSPQIGDKVEFSI--------------------SDKQRPGQQIATCVRLLGRNSNSKR 564

  Fly   721 QLGGLSNGISSSSSNASLQNGYVMHGSPGGSTSSVGSNNPVHLDEFKMENNNHAGSDAGQVYRGF 785
            .|                                                             |:
Mouse   565 LL-------------------------------------------------------------GY 568

  Fly   786 IAVMKENFGFIETLSHDEEVFFHFSNYMGNPNWLELGQEVEYTLARNGNTSVSGNCLPAENVRML 850
            :|.:|:|||||||.:||:|:|||:|.:.|:.:.||||..|||:|::.     .||.:.||.|...
Mouse   569 VATLKDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKG-----KGNKVSAEKVNKA 628

  Fly   851 PK-NSIPQPAVLETTHNGVVARPLRCINPDQQEYAGLIEILDE--LRTTVISQHEFGITSLVNKR 912
            .. |.|.:.| ..|.::|.|.||||.::|.|.||.|:|||::|  ::..|   :.|||..:.||.
Mouse   629 HSVNGITEEA-NPTIYSGKVIRPLRGVDPTQIEYQGMIEIVEEGDMKGEV---YPFGIVGMANKG 689

  Fly   913 DLLQKGDLVSFRIDESGRAACVNA--VRQKKRATVDSIKGQFGFLNFEVEDGKKLFFHMSEVQGN 975
            |.||||:.|.|::...|:.|...|  :...:||||:.:|.||||:|:||.|.||||||:.||| :
Mouse   690 DCLQKGESVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQ-D 753

  Fly   976 TVALHPGDTVEFSVVTNQRNGKSSACNVLKIND--------RPDRLISRLK-LNGDD-TVPRLIL 1030
            .|.|..||.|||||:.|||.||.|||||.::.:        |||||::||| :..|| :.|||::
Mouse   754 GVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMV 818

  Fly  1031 IRAPKGPQGK-GF 1042
            :|.|:||... ||
Mouse   819 LRQPRGPDNSMGF 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UnrNP_001137912.1 CSP 188..251 CDD:214633 44/62 (71%)
S1_like 347..395 CDD:299122 36/48 (75%)
CSP 537..604 CDD:214633 34/66 (52%)
S1_like 790..834 CDD:299122 24/43 (56%)
CSP 942..1006 CDD:214633 41/63 (65%)
Csde1XP_006501460.1 CSD 72..136 CDD:278729 45/63 (71%)
3_prime_RNase 231..>404 CDD:273033 93/201 (46%)
CSD 232..294 CDD:278729 40/86 (47%)
CSP 396..459 CDD:214633 34/66 (52%)
CSD 567..627 CDD:278729 31/64 (48%)
CSD 720..784 CDD:278729 41/64 (64%)
SUZ-C 818..834 CDD:372374 6/14 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838516
Domainoid 1 1.000 97 1.000 Domainoid score I7252
eggNOG 1 0.900 - - E1_28K4H
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5179
Inparanoid 1 1.050 615 1.000 Inparanoid score I895
Isobase 1 0.950 - 0 Normalized mean entropy S7206
OMA 1 1.010 - - QHG47946
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008060
OrthoInspector 1 1.000 - - oto94929
orthoMCL 1 0.900 - - OOG6_105871
Panther 1 1.100 - - LDO PTHR12913
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4970
SonicParanoid 1 1.000 - - X6011
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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