DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and AT1G08050

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_172283.1 Gene:AT1G08050 / 837321 AraportID:AT1G08050 Length:641 Species:Arabidopsis thaliana


Alignment Length:91 Identity:26/91 - (28%)
Similarity:34/91 - (37%) Gaps:15/91 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 CKIC-----AENDKDIRIEPCGHLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVDAFDPRKQ 428
            |.||     .|:.|.|....|.|.....|:|| .|....:.||.||.:.|......||:..    
plant    69 CAICLYEIRKEDGKAIFTAECSHSFHFDCITS-NVKHGNRICPLCRTQWKQVPLCDVDSVP---- 128

  Fly   429 HNRNVTNGRQQQQEEDDTEDIGDFNI 454
                 |...|:..|:|:....||..|
plant   129 -----TFVAQRGFEDDEPLPQGDTQI 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631 17/50 (34%)
UBA_Cbl_like 834..873 CDD:270503
AT1G08050NP_172283.1 RING-H2 69..113 CDD:319362 14/44 (32%)
vWA_C3HC4_type 203..368 CDD:238743
Vwaint 551..623 CDD:405329
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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