DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and AT5G17600

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_197262.1 Gene:AT5G17600 / 831626 AraportID:AT5G17600 Length:362 Species:Arabidopsis thaliana


Alignment Length:314 Identity:65/314 - (20%)
Similarity:105/314 - (33%) Gaps:93/314 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 IGYVTAEGEILQTIPQNKSLCQALLDGHREGFY-----LYPDGQAYNPDLSSAVQSPTEDHITVT 352
            :.|.|...:......|..|.....|:.:.|||:     :..:|...|   .|.::|       :|
plant    72 VSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN---ESMIKS-------IT 126

  Fly   353 QEQYELYCEMGSTF---QLCKICA---ENDKDIRIEP-CGHLLCTPCLTSWQVDSEGQGCPFCRA 410
            ..:|    :.|..|   ..|.:|.   |.::.:|:.| |.|....||:.:|.  .....||.|||
plant   127 VYKY----KSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWL--KSHSNCPLCRA 185

  Fly   411 EIKGTEQIVVDAFDPRKQHNRNVT----NGRQQQQEEDDTEDI-----------GDFN--IATSS 458
            .:.|..       :|.....:||:    |......:.....:|           |||:  :....
plant   186 FVTGVN-------NPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIED 243

  Fly   459 LHALSTSSTVAAEKHSPHTSPRLGRRSTTPSLMAVQNDLYAGGTPTLSLPSSSCSSIAAASTSSS 523
            |...|.:|...:|...|..     ||.|.      ..|         |||      |..:.:.:|
plant   244 LEIGSRNSDARSELQLPEE-----RRETK------DED---------SLP------IRRSVSLNS 282

  Fly   524 SSLASVATV----------AASTSSSQHQQ-----PQPSAPPASAVLSNGGGGG 562
            ..:.|:|.|          :....:||.::     ...:.||..|...:||..|
plant   283 GVVVSIADVLREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSG 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176 10/51 (20%)
zf-C3HC4_3 367..415 CDD:290631 15/51 (29%)
UBA_Cbl_like 834..873 CDD:270503
AT5G17600NP_197262.1 zf-rbx1 122..184 CDD:289448 17/74 (23%)
zf-RING_2 141..184 CDD:290367 12/44 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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