DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cbl and PRT1

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_189124.1 Gene:PRT1 / 822078 AraportID:AT3G24800 Length:410 Species:Arabidopsis thaliana


Alignment Length:77 Identity:20/77 - (25%)
Similarity:35/77 - (45%) Gaps:17/77 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 LCKICAENDKDIRIEP----CGHLLCTPCLTSWQVDSEGQGCPFCR-AEIKG-------TEQIVV 420
            ||..|    |::.:.|    |||:.|..|:.....:||...|..|. .:.:|       .||::.
plant   191 LCSAC----KELLVRPVVLNCGHVYCEGCVVDMAEESEKIKCQECNVCDPRGFPKVCLILEQLLE 251

  Fly   421 DAFDPRKQHNRN 432
            :.| |.:.::|:
plant   252 ENF-PEEYNSRS 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631 15/58 (26%)
UBA_Cbl_like 834..873 CDD:270503
PRT1NP_189124.1 RING 26..68 CDD:238093
RING 192..228 CDD:302633 11/39 (28%)
ZZ_PCMF_like 309..364 CDD:239078
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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