DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and RHC1A

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_001324188.1 Gene:RHC1A / 818680 AraportID:AT2G40830 Length:328 Species:Arabidopsis thaliana


Alignment Length:174 Identity:43/174 - (24%)
Similarity:63/174 - (36%) Gaps:46/174 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 PDLSSAVQS-PTEDHITVTQEQYELYCEMGSTFQLCKICA---ENDKDIRIEPCGHLLCTPCLTS 395
            |...||:.: ||   |.:.|.      .:.|:...|.:|.   |...:.:..||.|:..:.|:..
plant   164 PAPRSAIDALPT---IKIAQR------HLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVP 219

  Fly   396 WQVDSEGQGCPFCRAEIKGTEQIVVDAFDPRKQHNRNVTNGRQQQQEEDDTEDIGDFNIATSSLH 460
            |.|  :...||.||.|:.       .|..|....||.....                |..:||..
plant   220 WLV--QHNSCPVCRQELP-------SASGPSSSQNRTTPTR----------------NYRSSSSS 259

  Fly   461 ALSTSSTVAAEKHSPHTS--PRLGRRSTTPSLMAVQNDLYAGGT 502
            :.|.|.....|:.:|.:|  |   .||:..|..:.||   .|||
plant   260 SSSNSRENGNERRNPFSSFWP---FRSSGSSSSSTQN---RGGT 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176 1/4 (25%)
zf-C3HC4_3 367..415 CDD:290631 14/50 (28%)
UBA_Cbl_like 834..873 CDD:270503
RHC1ANP_001324188.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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