DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and AT2G27940

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_180361.1 Gene:AT2G27940 / 817338 AraportID:AT2G27940 Length:237 Species:Arabidopsis thaliana


Alignment Length:84 Identity:21/84 - (25%)
Similarity:34/84 - (40%) Gaps:22/84 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 CKICA---ENDKDIRIEP-CGHLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVDAFDPRKQH 429
            |.||.   |..:.:::.| |||:....|:.:|.  |....||.||     :.|:..|.       
plant   140 CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWL--SSYVTCPLCR-----SNQLFSDK------- 190

  Fly   430 NRNVTNGRQQQQEEDDTED 448
                ..|.|:..::|..|:
plant   191 ----DLGMQEPPDQDSAEE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631 15/49 (31%)
UBA_Cbl_like 834..873 CDD:270503
AT2G27940NP_180361.1 RING-H2_EL5_like 139..182 CDD:319375 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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