DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cbl and PEX10

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_565621.1 Gene:PEX10 / 817175 AraportID:AT2G26350 Length:381 Species:Arabidopsis thaliana


Alignment Length:215 Identity:45/215 - (20%)
Similarity:71/215 - (33%) Gaps:70/215 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 RLFQPWVTLLRNWQILAVTHPGYVAFLTYDEVKARLQRYILKAG-------SYVFRLSCTRLGQW 291
            ||.:.|...::.|.::.             .|...:.:.:|:|.       .:.:.:|....|  
plant   182 RLMRSWHRAIQRWPVVL-------------PVAREVLQLVLRANLMLFYFEGFYYHISKRASG-- 231

  Fly   292 AIGYVTAEGEILQTIPQNK--------SLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDH 348
             :.||.. |:.|...|:.:        .||....:|.|..            :|||...|..:..
plant   232 -VRYVFI-GKQLNQRPRYQILGVFLLIQLCILAAEGLRRS------------NLSSITSSIQQAS 282

  Fly   349 I-----------TVTQEQYELY---CEMG--------STFQL--CKICAENDKDIRIEPCGHLLC 389
            |           .|..|:..|.   .|.|        ||..:  |.:|....:.....||||:.|
plant   283 IGSYQTSGGRGLPVLNEEGNLITSEAEKGNWSTSDSTSTEAVGKCTLCLSTRQHPTATPCGHVFC 347

  Fly   390 TPCLTSWQVDSEGQGCPFCR 409
            ..|:..|  .:|.|.||.||
plant   348 WSCIMEW--CNEKQECPLCR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857 4/15 (27%)
SH2_Cbl-b_TKB 244..340 CDD:198176 17/110 (15%)
zf-C3HC4_3 367..415 CDD:290631 15/45 (33%)
UBA_Cbl_like 834..873 CDD:270503
PEX10NP_565621.1 Pex2_Pex12 41..268 CDD:282595 17/102 (17%)
RING 326..367 CDD:238093 15/42 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.