DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and AT2G03000

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_178400.1 Gene:AT2G03000 / 814829 AraportID:AT2G03000 Length:535 Species:Arabidopsis thaliana


Alignment Length:455 Identity:93/455 - (20%)
Similarity:160/455 - (35%) Gaps:146/455 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 NIATSSLHALSTSSTVAAEKHSPHTSPRLGRRSTTPSLMAVQNDLYAGGTPTLSLPS-------- 509
            |:.||:.:..|||.          .:||:...|           :.:||    ..|.        
plant    29 NLPTSTSNMRSTSL----------MTPRVAHTS-----------MSSGG----DFPDDRFFHARH 68

  Fly   510 SSCSSIAAASTSSSSSLASVATVAASTSSSQHQQPQPSAPPASAVLSNGGGGGGGGGASSSQKNT 574
            .|.:..||::.|.:....|...|.:|||:|..            ||.          .|.|::.|
plant    69 QSATDRAASNRSRAIMPISTTNVPSSTSNSPR------------VLQ----------TSMSRRGT 111

  Fly   575 NRMSAPLIGSCVANSTYGQKLPQNCS----HSSTS------SSSDNASSSS----------SYAI 619
            :.||:....|..|:.:..:.:|.:.|    .:|||      :||.|..:||          ||..
plant   112 SPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQ 176

  Fly   620 LQNLHDTG-TPATAAAVVAPPLPPRKSSPGVETPSKATAPPPPSSSKSIDNIQCSLDNVPPQTTA 683
            ..:|.:|. ||:|.:.    |..|..:||.|...|.:.....|.||.:..|:|.|:.        
plant   177 FGSLWETNTTPSTRSW----PTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMS-------- 229

  Fly   684 PPIPPHVSPSVDTLAEDLMRQQLIATSTTSPVLSLLDEDIVEVGPAETISGVIDTRPLEARGVTL 748
                     ..:|::.        :|||:|...|:...:|:               |..:|.|..
plant   230 ---------GRETVSS--------STSTSSMQTSMSTPEIM---------------PTSSRNVIT 262

  Fly   749 CRQDSASSHYTQLCTTSSGGSAAALANGKKANSAKQSQATTTTSAAAAAATAGNGSN--PGQQSQ 811
            ..::.|::..||......|                :...|.|||:..:..|....:.  |...|.
plant   263 RSEEVANTFSTQTPYIQFG----------------RLWETNTTSSTRSRTTVPTSTTNVPSSNSS 311

  Fly   812 PLLYANVTINQKDCGTVPYENINLEYIARLMNAGYSKENAITALGI----SRNNIEMAGDILREF 872
            .:|..:::..    ||.|..:.....:...|.|..:..::::.:.|    :||.|.|:.::...|
plant   312 RVLQTSMSTR----GTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSF 372

  Fly   873  872
            plant   373  372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631
UBA_Cbl_like 834..873 CDD:270503 8/43 (19%)
AT2G03000NP_178400.1 zf-rbx1 464..522 CDD:289448
zf-RING_2 479..522 CDD:290367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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