DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and RNF113A

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_008909.1 Gene:RNF113A / 7737 HGNCID:12974 Length:343 Species:Homo sapiens


Alignment Length:129 Identity:28/129 - (21%)
Similarity:42/129 - (32%) Gaps:23/129 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 YPDGQAYNPDLSSAVQSPTEDHITVTQEQYELYCEMGSTFQLCKICAENDKDIRIEPCGHLLCTP 391
            |..|.....:|........||      |.||:..:.......|.||.::.::..:..|.|..|..
Human   226 YKHGWQIERELDEGRYGVYED------ENYEVGSDDEEIPFKCFICRQSFQNPVVTKCRHYFCES 284

  Fly   392 C-LTSWQVDSEGQGCPFCRAEIKGTEQIVVDAFDPRK------QHNRNVTNGRQQQQEEDDTED 448
            | |..::....   |..|..:..|       .|:|.|      :.:|....|......||..||
Human   285 CALQHFRTTPR---CYVCDQQTNG-------VFNPAKELIAKLEKHRATGEGGASDLPEDPDED 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176 3/12 (25%)
zf-C3HC4_3 367..415 CDD:290631 10/48 (21%)
UBA_Cbl_like 834..873 CDD:270503
RNF113ANP_008909.1 Important for interaction with SNRNP200/BRR2. /evidence=ECO:0000269|PubMed:29144457 2..60
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..96
COG5152 30..322 CDD:227481 22/111 (20%)
Important for interaction with CXCR4. /evidence=ECO:0000269|PubMed:28978524 50..61
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..343 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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